Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS45Q9NRW7 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.07□□□□□ -1.6
VPS45Q9NRW7 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 AC000367.1-201ENST00000452711 1766 ntBASIC5.06□□□□□ -1.6
VPS45Q9NRW7 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 NACA3P-201ENST00000359690 648 ntBASIC5.06□□□□□ -1.6
VPS45Q9NRW7 SNORD113-6-201ENST00000363345 75 ntBASIC5.06□□□□□ -1.6
VPS45Q9NRW7 Y_RNA.169-201ENST00000363745 96 ntBASIC5.06□□□□□ -1.6
VPS45Q9NRW7 SNORD116.1-201ENST00000365628 92 ntBASIC5.06□□□□□ -1.6
VPS45Q9NRW7 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 AL049693.1-201ENST00000402760 611 ntBASIC5.06□□□□□ -1.6
VPS45Q9NRW7 PRRC2CP1-201ENST00000404428 159 ntBASIC5.06□□□□□ -1.6
VPS45Q9NRW7 AL356131.1-201ENST00000405826 414 ntBASIC5.06□□□□□ -1.6
VPS45Q9NRW7 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 HMGB1P45-201ENST00000435986 653 ntBASIC5.06□□□□□ -1.6
VPS45Q9NRW7 AC234064.1-201ENST00000436312 247 ntBASIC5.06□□□□□ -1.6
VPS45Q9NRW7 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 AL691482.1-201ENST00000453255 87 ntBASIC5.06□□□□□ -1.6
VPS45Q9NRW7 ART2BP-201ENST00000453501 499 ntBASIC5.06□□□□□ -1.6
VPS45Q9NRW7 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 AC010468.1-201ENST00000461022 817 ntBASIC5.06□□□□□ -1.6
VPS45Q9NRW7 RN7SL517P-201ENST00000462240 305 ntBASIC5.06□□□□□ -1.6
VPS45Q9NRW7 RPS3AP22-201ENST00000488297 769 ntBASIC5.06□□□□□ -1.6
VPS45Q9NRW7 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 RN7SKP46-201ENST00000515942 234 ntBASIC5.06□□□□□ -1.6
VPS45Q9NRW7 RN7SKP92-201ENST00000517266 244 ntBASIC5.06□□□□□ -1.6
VPS45Q9NRW7 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 TVP23CP2-201ENST00000571473 623 ntBASIC5.06□□□□□ -1.6
VPS45Q9NRW7 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 AC040904.1-201ENST00000590850 223 ntBASIC5.06□□□□□ -1.6
VPS45Q9NRW7 AL158163.2-201ENST00000619110 700 ntBASIC5.06□□□□□ -1.6
VPS45Q9NRW7 AC131159.1-201ENST00000621854 213 ntBASIC5.06□□□□□ -1.6
VPS45Q9NRW7 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 MIR3974-201ENST00000637126 96 ntBASIC5.06□□□□□ -1.6
VPS45Q9NRW7 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 ECM1P2-201ENST00000503354 1577 ntBASIC5.06□□□□□ -1.6
VPS45Q9NRW7 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
VPS45Q9NRW7 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS45Q9NRW7 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS45Q9NRW7 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS45Q9NRW7 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS45Q9NRW7 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
VPS45Q9NRW7 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VPS45Q9NRW7 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.05□□□□□ -1.6
VPS45Q9NRW7 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS45Q9NRW7 FAM133CP-201ENST00000332869 704 ntBASIC5.05□□□□□ -1.6
VPS45Q9NRW7 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VPS45Q9NRW7 SNORA70.10-201ENST00000384515 134 ntBASIC5.05□□□□□ -1.6
VPS45Q9NRW7 RNU6-83P-201ENST00000384568 112 ntBASIC5.05□□□□□ -1.6
VPS45Q9NRW7 RN7SKP27-201ENST00000410684 333 ntBASIC5.05□□□□□ -1.6
VPS45Q9NRW7 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS45Q9NRW7 AC004022.2-201ENST00000413824 193 ntBASIC5.05□□□□□ -1.6
VPS45Q9NRW7 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS45Q9NRW7 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.05□□□□□ -1.6
VPS45Q9NRW7 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS45Q9NRW7 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS45Q9NRW7 RPL7P11-201ENST00000437586 658 ntBASIC5.05□□□□□ -1.6
VPS45Q9NRW7 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS45Q9NRW7 OR1H1P-201ENST00000448731 937 ntBASIC5.05□□□□□ -1.6
VPS45Q9NRW7 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS45Q9NRW7 BET1P1-201ENST00000482276 359 ntBASIC5.05□□□□□ -1.6
VPS45Q9NRW7 HMGB1P21-201ENST00000502313 581 ntBASIC5.05□□□□□ -1.6
VPS45Q9NRW7 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS45Q9NRW7 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS45Q9NRW7 AC111000.3-201ENST00000508057 576 ntBASIC5.05□□□□□ -1.6
VPS45Q9NRW7 RNU6-488P-201ENST00000515918 99 ntBASIC5.05□□□□□ -1.6
VPS45Q9NRW7 Y_RNA.719-201ENST00000517156 106 ntBASIC5.05□□□□□ -1.6
VPS45Q9NRW7 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS45Q9NRW7 MTCO1P47-201ENST00000523889 1271 ntBASIC5.05□□□□□ -1.6
VPS45Q9NRW7 MTND2P26-201ENST00000528255 1029 ntBASIC5.05□□□□□ -1.6
VPS45Q9NRW7 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms