Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 RNA5SP183-201ENST00000362452 119 ntBASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 RNY3P10-201ENST00000384764 102 ntBASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 RN7SKP213-201ENST00000410746 298 ntBASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 RAD23BP2-201ENST00000416003 1207 ntBASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 AC048351.1-201ENST00000420064 602 ntBASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 GNG5P5-201ENST00000420444 220 ntBASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 RPL36AP10-201ENST00000421785 322 ntBASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 COX6CP12-201ENST00000446748 202 ntBASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 AC011225.1-201ENST00000457751 369 ntBASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 AL591473.1-201ENST00000464297 313 ntBASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 AC079841.1-201ENST00000481228 950 ntBASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 RN7SL547P-201ENST00000490793 290 ntBASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 RN7SL447P-201ENST00000494711 245 ntBASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 HIGD1AP14-201ENST00000507617 282 ntBASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 RPL7L1P13-201ENST00000511702 739 ntBASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 RNA5SP92-201ENST00000516437 110 ntBASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 AC018442.3-201ENST00000523025 183 ntBASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 AC093519.1-201ENST00000566109 298 ntBASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 EIF1P4-201ENST00000572664 335 ntBASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 SUGT1P3-202ENST00000604259 383 ntBASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 AC018695.5-201ENST00000605872 315 ntBASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 AC087241.4-201ENST00000612441 480 ntBASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 AC092794.1-201ENST00000612734 582 ntBASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 AL356266.1-201ENST00000623311 483 ntBASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 AC025048.6-202ENST00000627667 438 ntBASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 CASC19-264ENST00000641912 1184 ntBASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
AMBRA1Q9C0C7 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 AC096656.1-201ENST00000623826 1364 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 RNU1-146P-201ENST00000364015 165 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 RNU6-374P-201ENST00000364146 108 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 RNU6-660P-201ENST00000364566 109 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 RNU4-91P-201ENST00000364778 135 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 AL645733.1-201ENST00000402250 217 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 RNA5SP487-201ENST00000410186 122 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 AL136133.1-201ENST00000413694 376 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 AP000936.3-201ENST00000438127 255 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 AL512286.1-201ENST00000439244 400 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 AC108463.1-201ENST00000450258 347 ntBASIC4.82□□□□□ -1.64
AMBRA1Q9C0C7 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms