Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 MIR548AB-201ENST00000584917 84 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 AC103881.1-201ENST00000603476 538 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 AC068276.1-201ENST00000605793 379 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 AC005021.1-201ENST00000608730 355 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 AL133370.2-201ENST00000619934 439 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 FAM157B-203ENST00000639350 358 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDK5RAP1Q96SZ6 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDK5RAP1Q96SZ6 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDK5RAP1Q96SZ6 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDK5RAP1Q96SZ6 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.4□□□□□ -1.55
CDK5RAP1Q96SZ6 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CDK5RAP1Q96SZ6 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.4□□□□□ -1.55
CDK5RAP1Q96SZ6 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
CDK5RAP1Q96SZ6 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDK5RAP1Q96SZ6 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDK5RAP1Q96SZ6 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 SNURFL-201ENST00000309296 343 ntBASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 Y_RNA.38-201ENST00000362617 102 ntBASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 RN7SKP226-201ENST00000364912 300 ntBASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 RNU6-1042P-201ENST00000384204 107 ntBASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 RNU6-253P-201ENST00000384730 105 ntBASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 EI24P3-201ENST00000399046 1062 ntBASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 GPS2P1-201ENST00000411761 986 ntBASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 AC010385.1-201ENST00000412374 256 ntBASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 Z99497.1-201ENST00000421282 135 ntBASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 AC073614.1-201ENST00000438690 650 ntBASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 RBMY2TP-201ENST00000451162 947 ntBASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 AC092647.2-201ENST00000452998 253 ntBASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 AC002553.2-201ENST00000453217 340 ntBASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 AC072039.1-201ENST00000477611 581 ntBASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 RN7SL97P-201ENST00000486780 299 ntBASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 AC098976.1-201ENST00000513014 541 ntBASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 AP000676.2-201ENST00000529711 301 ntBASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 AC068993.1-201ENST00000546724 589 ntBASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 LSM3P2-201ENST00000551246 273 ntBASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 AL138976.2-201ENST00000563989 694 ntBASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 CYP2C60P-201ENST00000566088 139 ntBASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 AP005119.2-201ENST00000579735 1105 ntBASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 MIR4443-201ENST00000585052 53 ntBASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 FER-210ENST00000628534 558 ntTSL 5 BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 AC127502.3-201ENST00000636170 1206 ntBASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 AC006026.1-201ENST00000444025 1803 ntBASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDK5RAP1Q96SZ6 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms