Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AC099782.1-201ENST00000425889 474 ntBASIC6.4□□□□□ -1.38
TRIM11Q96F44 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM11Q96F44 OR51AB1P-201ENST00000429046 620 ntBASIC6.4□□□□□ -1.38
TRIM11Q96F44 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM11Q96F44 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.4□□□□□ -1.38
TRIM11Q96F44 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.4□□□□□ -1.38
TRIM11Q96F44 RPS3AP38-201ENST00000435889 763 ntBASIC6.4□□□□□ -1.38
TRIM11Q96F44 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM11Q96F44 AL353093.1-201ENST00000441292 436 ntBASIC6.4□□□□□ -1.38
TRIM11Q96F44 AC104306.1-201ENST00000449702 371 ntBASIC6.4□□□□□ -1.38
TRIM11Q96F44 AC016027.4-201ENST00000450866 277 ntBASIC6.4□□□□□ -1.38
TRIM11Q96F44 AC002553.3-201ENST00000453002 341 ntBASIC6.4□□□□□ -1.38
TRIM11Q96F44 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM11Q96F44 AC083795.1-201ENST00000491760 320 ntBASIC6.4□□□□□ -1.38
TRIM11Q96F44 HMGN1P16-201ENST00000508308 283 ntBASIC6.4□□□□□ -1.38
TRIM11Q96F44 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC6.4□□□□□ -1.38
TRIM11Q96F44 RN7SKP256-201ENST00000517201 314 ntBASIC6.4□□□□□ -1.38
TRIM11Q96F44 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM11Q96F44 AC130365.2-201ENST00000525882 1201 ntBASIC6.4□□□□□ -1.38
TRIM11Q96F44 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC6.4□□□□□ -1.38
TRIM11Q96F44 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.4□□□□□ -1.38
TRIM11Q96F44 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.4□□□□□ -1.38
TRIM11Q96F44 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM11Q96F44 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM11Q96F44 AC079075.1-201ENST00000559543 878 ntBASIC6.4□□□□□ -1.38
TRIM11Q96F44 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC6.4□□□□□ -1.38
TRIM11Q96F44 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.4□□□□□ -1.38
TRIM11Q96F44 AL161734.1-201ENST00000609720 557 ntBASIC6.4□□□□□ -1.38
TRIM11Q96F44 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC6.4□□□□□ -1.38
TRIM11Q96F44 AL732618.1-201ENST00000623251 301 ntBASIC6.4□□□□□ -1.38
TRIM11Q96F44 AC090617.10-201ENST00000624308 134 ntBASIC6.4□□□□□ -1.38
TRIM11Q96F44 U2.22-201ENST00000636441 106 ntBASIC6.4□□□□□ -1.38
TRIM11Q96F44 AC007603.3-201ENST00000636915 979 ntBASIC6.4□□□□□ -1.38
TRIM11Q96F44 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
TRIM11Q96F44 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.4□□□□□ -1.39
TRIM11Q96F44 AC026523.2-201ENST00000625039 7739 ntBASIC6.4□□□□□ -1.39
TRIM11Q96F44 AC006484.1-201ENST00000435086 1884 ntBASIC6.4□□□□□ -1.39
TRIM11Q96F44 ELL2P4-201ENST00000446870 1376 ntBASIC6.4□□□□□ -1.39
TRIM11Q96F44 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.4□□□□□ -1.39
TRIM11Q96F44 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM11Q96F44 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM11Q96F44 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM11Q96F44 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC6.4□□□□□ -1.39
TRIM11Q96F44 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM11Q96F44 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
TRIM11Q96F44 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM11Q96F44 AC245100.2-201ENST00000454544 1679 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TRIM11Q96F44 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM11Q96F44 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM11Q96F44 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM11Q96F44 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM11Q96F44 Y_RNA.28-201ENST00000362554 111 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 RN7SKP44-201ENST00000363602 316 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 Y_RNA.381-201ENST00000365666 102 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM11Q96F44 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
TRIM11Q96F44 AC117470.1-201ENST00000381974 330 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 SNORD116-29-201ENST00000384516 83 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 MIR188-201ENST00000385034 86 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TRIM11Q96F44 RPA3-203ENST00000401447 414 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM11Q96F44 RPS4XP8-201ENST00000402039 771 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 RNU6-1148P-201ENST00000410992 104 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 AC245096.1-201ENST00000413104 546 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.39□□□□□ -1.39
TRIM11Q96F44 Z82198.3-201ENST00000421145 199 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 RBM6-203ENST00000421682 684 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM11Q96F44 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM11Q96F44 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM11Q96F44 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM11Q96F44 RPS24P6-201ENST00000452670 400 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 AC091685.2-201ENST00000454924 864 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 RPL18AP17-201ENST00000455326 198 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 ACA64.4-201ENST00000459070 127 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 RN7SL552P-201ENST00000462094 276 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 RPS3AP50-201ENST00000487064 803 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 RPL12P30-201ENST00000488389 499 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM11Q96F44 AC010587.1-201ENST00000505809 469 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 HMGB3P15-201ENST00000507326 574 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 HMGB1P28-201ENST00000507778 552 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 ZNF519P4-201ENST00000514008 125 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 RNU6-559P-201ENST00000516151 98 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 RNU6-406P-201ENST00000516470 107 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM11Q96F44 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.39□□□□□ -1.39
TRIM11Q96F44 SLC2A13P1-201ENST00000531560 322 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 AC013828.2-201ENST00000532487 235 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 SNRPGP18-201ENST00000553000 214 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 NPM1P42-201ENST00000560329 862 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM11Q96F44 MYL12BP1-201ENST00000569826 507 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM11Q96F44 UBE2L4-201ENST00000587688 464 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 CKS1BP3-201ENST00000600888 237 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 AP001330.4-201ENST00000604350 154 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 AC021646.1-201ENST00000605469 484 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 AC113194.1-201ENST00000606037 500 ntBASIC6.39□□□□□ -1.39
TRIM11Q96F44 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms