Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
TOPBP1Q92547 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC5.79□□□□□ -1.48
TOPBP1Q92547 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
TOPBP1Q92547 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
TOPBP1Q92547 NCOA4P2-201ENST00000340589 1813 ntBASIC5.79□□□□□ -1.48
TOPBP1Q92547 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TOPBP1Q92547 HSPA8P19-201ENST00000505359 1517 ntBASIC5.79□□□□□ -1.48
TOPBP1Q92547 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
TOPBP1Q92547 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TOPBP1Q92547 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.79□□□□□ -1.48
TOPBP1Q92547 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.79□□□□□ -1.48
TOPBP1Q92547 RPL7P28-201ENST00000437739 740 ntBASIC5.79□□□□□ -1.48
TOPBP1Q92547 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.79□□□□□ -1.48
TOPBP1Q92547 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.79□□□□□ -1.48
TOPBP1Q92547 RPL12P50-201ENST00000603116 116 ntBASIC5.79□□□□□ -1.48
TOPBP1Q92547 MIR7106-201ENST00000612419 65 ntBASIC5.79□□□□□ -1.48
TOPBP1Q92547 AC138965.3-201ENST00000623875 498 ntBASIC5.79□□□□□ -1.48
TOPBP1Q92547 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TOPBP1Q92547 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TOPBP1Q92547 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TOPBP1Q92547 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
TOPBP1Q92547 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TOPBP1Q92547 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TOPBP1Q92547 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TOPBP1Q92547 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TOPBP1Q92547 RNA5-8SP4-201ENST00000365096 150 ntBASIC5.78□□□□□ -1.48
TOPBP1Q92547 RSL24D1P1-201ENST00000404972 493 ntBASIC5.78□□□□□ -1.48
TOPBP1Q92547 RNU4-47P-201ENST00000410876 114 ntBASIC5.78□□□□□ -1.48
TOPBP1Q92547 RNA5SP306-201ENST00000411087 107 ntBASIC5.78□□□□□ -1.48
TOPBP1Q92547 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.78□□□□□ -1.48
TOPBP1Q92547 BX119904.1-201ENST00000432026 348 ntBASIC5.78□□□□□ -1.48
TOPBP1Q92547 AC021678.1-201ENST00000505195 936 ntBASIC5.78□□□□□ -1.48
TOPBP1Q92547 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TOPBP1Q92547 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.78□□□□□ -1.48
TOPBP1Q92547 RNVU1-4-201ENST00000612985 164 ntBASIC5.78□□□□□ -1.48
TOPBP1Q92547 AC091905.1-201ENST00000624400 311 ntBASIC5.78□□□□□ -1.48
TOPBP1Q92547 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.78□□□□□ -1.48
TOPBP1Q92547 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.78□□□□□ -1.48
TOPBP1Q92547 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC5.78□□□□□ -1.48
TOPBP1Q92547 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TOPBP1Q92547 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.48
TOPBP1Q92547 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TOPBP1Q92547 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC5.77□□□□□ -1.49
TOPBP1Q92547 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TOPBP1Q92547 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
TOPBP1Q92547 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
TOPBP1Q92547 AC092435.3-201ENST00000565538 3654 ntBASIC5.77□□□□□ -1.49
TOPBP1Q92547 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.77□□□□□ -1.49
TOPBP1Q92547 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
TOPBP1Q92547 RPL23AP69-201ENST00000431134 458 ntBASIC5.77□□□□□ -1.49
TOPBP1Q92547 RN7SKP209-201ENST00000516888 304 ntBASIC5.77□□□□□ -1.49
TOPBP1Q92547 AP006245.1-201ENST00000522549 120 ntBASIC5.77□□□□□ -1.49
TOPBP1Q92547 OR7A8P-201ENST00000595427 913 ntBASIC5.77□□□□□ -1.49
TOPBP1Q92547 MRPS35P3-201ENST00000603189 709 ntBASIC5.77□□□□□ -1.49
TOPBP1Q92547 BMS1P21-201ENST00000634565 365 ntBASIC5.77□□□□□ -1.49
TOPBP1Q92547 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TOPBP1Q92547 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
TOPBP1Q92547 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
TOPBP1Q92547 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TOPBP1Q92547 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TOPBP1Q92547 RNA5SP432-201ENST00000362480 116 ntBASIC5.76□□□□□ -1.49
TOPBP1Q92547 RPL5P18-201ENST00000406671 891 ntBASIC5.76□□□□□ -1.49
TOPBP1Q92547 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.76□□□□□ -1.49
TOPBP1Q92547 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.76□□□□□ -1.49
TOPBP1Q92547 AC018442.3-201ENST00000523025 183 ntBASIC5.76□□□□□ -1.49
TOPBP1Q92547 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC5.76□□□□□ -1.49
TOPBP1Q92547 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC5.76□□□□□ -1.49
TOPBP1Q92547 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.76□□□□□ -1.49
TOPBP1Q92547 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TOPBP1Q92547 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TOPBP1Q92547 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.76□□□□□ -1.49
TOPBP1Q92547 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.76□□□□□ -1.49
TOPBP1Q92547 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TOPBP1Q92547 AC068254.2-201ENST00000623938 3577 ntBASIC5.75□□□□□ -1.49
TOPBP1Q92547 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TOPBP1Q92547 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TOPBP1Q92547 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TOPBP1Q92547 MIR422A-201ENST00000362286 90 ntBASIC5.75□□□□□ -1.49
TOPBP1Q92547 HMGN1P24-201ENST00000412282 298 ntBASIC5.75□□□□□ -1.49
TOPBP1Q92547 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.75□□□□□ -1.49
TOPBP1Q92547 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TOPBP1Q92547 AL121766.1-201ENST00000547436 487 ntBASIC5.75□□□□□ -1.49
TOPBP1Q92547 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.75□□□□□ -1.49
TOPBP1Q92547 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.75□□□□□ -1.49
TOPBP1Q92547 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.75□□□□□ -1.49
TOPBP1Q92547 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.75□□□□□ -1.49
TOPBP1Q92547 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.75□□□□□ -1.49
TOPBP1Q92547 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.75□□□□□ -1.49
TOPBP1Q92547 DLD-214ENST00000639772 421 ntTSL 5 BASIC5.75□□□□□ -1.49
TOPBP1Q92547 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
TOPBP1Q92547 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC5.75□□□□□ -1.49
TOPBP1Q92547 TNPO1P3-201ENST00000436471 2662 ntBASIC5.75□□□□□ -1.49
TOPBP1Q92547 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TOPBP1Q92547 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.75□□□□□ -1.49
TOPBP1Q92547 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
TOPBP1Q92547 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC5.75□□□□□ -1.49
TOPBP1Q92547 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.75□□□□□ -1.49
TOPBP1Q92547 AC011266.1-201ENST00000624119 3569 ntBASIC5.75□□□□□ -1.49
TOPBP1Q92547 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TOPBP1Q92547 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms