Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 AC092125.1-201ENST00000562568 1995 ntBASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 AC007996.1-201ENST00000620414 2821 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 AL157777.2-201ENST00000258070 137 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 RPL23AP57-201ENST00000332361 466 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 SNORD35A-201ENST00000363389 86 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 RNY4P16-201ENST00000364768 94 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 RNU4-48P-201ENST00000365559 182 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 Y_RNA.489-201ENST00000384410 101 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 AL391419.1-201ENST00000398901 1275 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 RNU2-64P-201ENST00000411315 191 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 OFD1P1Y-201ENST00000411756 1225 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 HNRNPDLP1-201ENST00000412834 550 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 RPS15AP12-201ENST00000419498 388 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 THEM7P-201ENST00000419556 672 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 RPL7AP51-201ENST00000422016 760 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 NRBF2P3-201ENST00000432731 865 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 LINC00328-2P-201ENST00000436585 219 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 TUBB4BP6-201ENST00000437576 479 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 TRAPPC2P3-201ENST00000443200 321 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 AC234771.2-201ENST00000445718 597 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 AC007383.1-201ENST00000445875 636 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 RPL21P23-201ENST00000446654 460 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 AC004980.3-201ENST00000447046 365 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 AC002381.1-201ENST00000447049 280 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 UBFD1P1-201ENST00000473259 814 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 RN7SL568P-201ENST00000493069 298 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 AC015911.1-201ENST00000495111 156 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 FTH1P9-201ENST00000513251 355 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 RNA5SP337-201ENST00000517007 109 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 MYL12AP1-201ENST00000518490 515 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 IMMP1LP2-201ENST00000552954 492 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 AC053481.3-201ENST00000577881 843 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 MIR4271-201ENST00000582451 67 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 MAGOH2P-202ENST00000584384 429 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 AF038458.1-201ENST00000588406 262 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 AC062037.2-201ENST00000610137 73 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 LINC02495-203ENST00000636704 242 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 OR52H1-202ENST00000641796 1061 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 TTC41P-205ENST00000551270 3963 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 PARP4P1-201ENST00000435945 2337 ntBASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LYSMD3Q7Z3D4 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LYSMD3Q7Z3D4 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
LYSMD3Q7Z3D4 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.47□□□□□ -1.37
LYSMD3Q7Z3D4 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
LYSMD3Q7Z3D4 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.47□□□□□ -1.37
LYSMD3Q7Z3D4 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
LYSMD3Q7Z3D4 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.47□□□□□ -1.37
LYSMD3Q7Z3D4 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LYSMD3Q7Z3D4 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 192.8 ms