Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDH1Q08174 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDH1Q08174 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDH1Q08174 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDH1Q08174 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
PCDH1Q08174 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDH1Q08174 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDH1Q08174 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PCDH1Q08174 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDH1Q08174 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDH1Q08174 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDH1Q08174 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PCDH1Q08174 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDH1Q08174 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
PCDH1Q08174 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDH1Q08174 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.94□□□□□ -1.46
PCDH1Q08174 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
PCDH1Q08174 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
PCDH1Q08174 RPL7P26-201ENST00000333817 754 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDH1Q08174 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
PCDH1Q08174 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDH1Q08174 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDH1Q08174 SNORA32.2-201ENST00000384049 122 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 Y_RNA.474-201ENST00000384341 102 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 MIR606-201ENST00000384851 96 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 EIF5P1-201ENST00000400019 1231 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 PSMA6P1-201ENST00000400275 741 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 PRRC2CP1-201ENST00000404428 159 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.94□□□□□ -1.46
PCDH1Q08174 MTND3P8-201ENST00000412909 339 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDH1Q08174 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.94□□□□□ -1.46
PCDH1Q08174 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.94□□□□□ -1.46
PCDH1Q08174 AC119618.1-201ENST00000434191 222 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 AC236972.2-201ENST00000434979 310 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDH1Q08174 RPS15AP9-201ENST00000439856 381 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 BRK1P2-201ENST00000442875 223 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 AC007383.1-201ENST00000445875 636 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 Y_RNA.632-201ENST00000459189 102 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 PABPC1P3-201ENST00000469174 459 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.94□□□□□ -1.46
PCDH1Q08174 RPS15AP36-201ENST00000492022 382 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDH1Q08174 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDH1Q08174 RN7SKP116-201ENST00000516902 319 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 SOD1P3-201ENST00000518682 454 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 BTF3P12-201ENST00000519620 469 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDH1Q08174 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.94□□□□□ -1.46
PCDH1Q08174 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDH1Q08174 AL049779.3-201ENST00000557141 606 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDH1Q08174 AC068714.1-201ENST00000559623 800 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.94□□□□□ -1.46
PCDH1Q08174 MT1CP-201ENST00000567054 174 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDH1Q08174 AC138207.8-204ENST00000579588 527 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.94□□□□□ -1.46
PCDH1Q08174 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDH1Q08174 AC119403.2-201ENST00000590960 598 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 AC012368.3-201ENST00000604190 219 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 AL133215.3-201ENST00000609801 448 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 AC105429.2-201ENST00000610567 517 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 AC093913.1-201ENST00000614178 329 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 AC068831.8-201ENST00000620171 435 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 AL356585.4-201ENST00000623078 1229 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 AC090617.10-201ENST00000624308 134 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDH1Q08174 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDH1Q08174 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
PCDH1Q08174 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDH1Q08174 AC092125.1-201ENST00000562568 1995 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 AL731532.1-201ENST00000623972 4236 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 KPNA2P2-201ENST00000419546 1489 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDH1Q08174 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
PCDH1Q08174 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDH1Q08174 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDH1Q08174 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
PCDH1Q08174 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDH1Q08174 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
PCDH1Q08174 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDH1Q08174 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDH1Q08174 RIOK3P1-201ENST00000418778 1528 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 AC016583.1-201ENST00000624221 2431 ntBASIC5.94□□□□□ -1.46
PCDH1Q08174 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDH1Q08174 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.94□□□□□ -1.46
PCDH1Q08174 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDH1Q08174 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDH1Q08174 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.93□□□□□ -1.46
PCDH1Q08174 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PCDH1Q08174 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
PCDH1Q08174 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.93□□□□□ -1.46
PCDH1Q08174 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PCDH1Q08174 AC130304.1-201ENST00000622942 2385 ntBASIC5.93□□□□□ -1.46
PCDH1Q08174 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.93□□□□□ -1.46
PCDH1Q08174 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDH1Q08174 RNU6-1097P-201ENST00000363586 107 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms