Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 CYCSP53-201ENST00000455540 265 ntBASIC3.33□□□□□ -1.88
HIST1H3AP68431 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.33□□□□□ -1.88
HIST1H3AP68431 OR9M1P-201ENST00000459641 921 ntBASIC3.33□□□□□ -1.88
HIST1H3AP68431 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.33□□□□□ -1.88
HIST1H3AP68431 AC021146.1-201ENST00000511202 716 ntBASIC3.33□□□□□ -1.88
HIST1H3AP68431 RN7SKP209-201ENST00000516888 304 ntBASIC3.33□□□□□ -1.88
HIST1H3AP68431 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.33□□□□□ -1.88
HIST1H3AP68431 AC022790.1-201ENST00000522872 204 ntBASIC3.33□□□□□ -1.88
HIST1H3AP68431 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.33□□□□□ -1.88
HIST1H3AP68431 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.33□□□□□ -1.88
HIST1H3AP68431 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.33□□□□□ -1.88
HIST1H3AP68431 AL133457.1-201ENST00000564251 987 ntBASIC3.33□□□□□ -1.88
HIST1H3AP68431 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.33□□□□□ -1.88
HIST1H3AP68431 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.33□□□□□ -1.88
HIST1H3AP68431 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.33□□□□□ -1.88
HIST1H3AP68431 AC015726.1-201ENST00000602353 681 ntBASIC3.33□□□□□ -1.88
HIST1H3AP68431 BMS1P7-201ENST00000602440 1052 ntBASIC3.33□□□□□ -1.88
HIST1H3AP68431 AC010680.4-201ENST00000605334 543 ntBASIC3.33□□□□□ -1.88
HIST1H3AP68431 AC123768.4-201ENST00000616244 701 ntBASIC3.33□□□□□ -1.88
HIST1H3AP68431 uc_338.9-201ENST00000617424 182 ntBASIC3.33□□□□□ -1.88
HIST1H3AP68431 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.33□□□□□ -1.88
HIST1H3AP68431 AC091905.1-201ENST00000624400 311 ntBASIC3.33□□□□□ -1.88
HIST1H3AP68431 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HIST1H3AP68431 AL353746.1-201ENST00000566293 6881 ntBASIC3.33□□□□□ -1.88
HIST1H3AP68431 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.33□□□□□ -1.88
HIST1H3AP68431 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HIST1H3AP68431 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.33□□□□□ -1.88
HIST1H3AP68431 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HIST1H3AP68431 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HIST1H3AP68431 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HIST1H3AP68431 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HIST1H3AP68431 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HIST1H3AP68431 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HIST1H3AP68431 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HIST1H3AP68431 AL390879.2-203ENST00000426943 1121 ntBASIC3.32□□□□□ -1.88
HIST1H3AP68431 AC006511.1-201ENST00000470614 315 ntBASIC3.32□□□□□ -1.88
HIST1H3AP68431 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.32□□□□□ -1.88
HIST1H3AP68431 AP001960.1-201ENST00000506494 658 ntBASIC3.32□□□□□ -1.88
HIST1H3AP68431 RNA5SP208-201ENST00000516156 78 ntBASIC3.32□□□□□ -1.88
HIST1H3AP68431 SCARNA14-201ENST00000516903 136 ntBASIC3.32□□□□□ -1.88
HIST1H3AP68431 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.32□□□□□ -1.88
HIST1H3AP68431 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.32□□□□□ -1.88
HIST1H3AP68431 AP001180.3-201ENST00000582221 145 ntBASIC3.32□□□□□ -1.88
HIST1H3AP68431 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.32□□□□□ -1.88
HIST1H3AP68431 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC3.32□□□□□ -1.88
HIST1H3AP68431 AC099669.2-201ENST00000616549 437 ntBASIC3.32□□□□□ -1.88
HIST1H3AP68431 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.32□□□□□ -1.88
HIST1H3AP68431 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HIST1H3AP68431 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.32□□□□□ -1.88
HIST1H3AP68431 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HIST1H3AP68431 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.32□□□□□ -1.88
HIST1H3AP68431 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.32□□□□□ -1.88
HIST1H3AP68431 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HIST1H3AP68431 PRO1804-201ENST00000623780 2050 ntBASIC3.32□□□□□ -1.88
HIST1H3AP68431 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.32□□□□□ -1.88
HIST1H3AP68431 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HIST1H3AP68431 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HIST1H3AP68431 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.31□□□□□ -1.88
HIST1H3AP68431 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.31□□□□□ -1.88
HIST1H3AP68431 TNPO1P3-201ENST00000436471 2662 ntBASIC3.31□□□□□ -1.88
HIST1H3AP68431 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC3.31□□□□□ -1.88
HIST1H3AP68431 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HIST1H3AP68431 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HIST1H3AP68431 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
HIST1H3AP68431 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.31□□□□□ -1.88
HIST1H3AP68431 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.31□□□□□ -1.88
HIST1H3AP68431 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HIST1H3AP68431 RNA5SP283-201ENST00000365604 119 ntBASIC3.31□□□□□ -1.88
HIST1H3AP68431 HSPE1P8-201ENST00000406997 288 ntBASIC3.31□□□□□ -1.88
HIST1H3AP68431 SNORA3.3-201ENST00000408712 125 ntBASIC3.31□□□□□ -1.88
HIST1H3AP68431 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.31□□□□□ -1.88
HIST1H3AP68431 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.31□□□□□ -1.88
HIST1H3AP68431 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HIST1H3AP68431 YY1P1-201ENST00000427625 668 ntBASIC3.31□□□□□ -1.88
HIST1H3AP68431 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.31□□□□□ -1.88
HIST1H3AP68431 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.31□□□□□ -1.88
HIST1H3AP68431 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.31□□□□□ -1.88
HIST1H3AP68431 AC010307.1-201ENST00000467206 836 ntBASIC3.31□□□□□ -1.88
HIST1H3AP68431 RPL7L1P8-201ENST00000469911 741 ntBASIC3.31□□□□□ -1.88
HIST1H3AP68431 AC023050.1-201ENST00000498198 304 ntBASIC3.31□□□□□ -1.88
HIST1H3AP68431 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.31□□□□□ -1.88
HIST1H3AP68431 MTCO1P35-201ENST00000515270 228 ntBASIC3.31□□□□□ -1.88
HIST1H3AP68431 Vault.1-201ENST00000516474 102 ntBASIC3.31□□□□□ -1.88
HIST1H3AP68431 RNU6-352P-201ENST00000516908 107 ntBASIC3.31□□□□□ -1.88
HIST1H3AP68431 PARP1P2-201ENST00000556806 195 ntBASIC3.31□□□□□ -1.88
HIST1H3AP68431 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.31□□□□□ -1.88
HIST1H3AP68431 AL606490.9-201ENST00000603331 271 ntBASIC3.31□□□□□ -1.88
HIST1H3AP68431 BRDTP1-201ENST00000605735 677 ntBASIC3.31□□□□□ -1.88
HIST1H3AP68431 AL354760.1-201ENST00000608357 643 ntBASIC3.31□□□□□ -1.88
HIST1H3AP68431 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.31□□□□□ -1.88
HIST1H3AP68431 AL391261.4-201ENST00000616012 481 ntBASIC3.31□□□□□ -1.88
HIST1H3AP68431 AL589935.2-201ENST00000616471 1231 ntBASIC3.31□□□□□ -1.88
HIST1H3AP68431 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.31□□□□□ -1.88
HIST1H3AP68431 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.31□□□□□ -1.88
HIST1H3AP68431 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.31□□□□□ -1.88
HIST1H3AP68431 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HIST1H3AP68431 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
HIST1H3AP68431 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HIST1H3AP68431 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HIST1H3AP68431 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms