Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.3□□□□□ -1.4
PDE6BP35913 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC6.3□□□□□ -1.4
PDE6BP35913 AC008443.7-201ENST00000622195 246 ntBASIC6.3□□□□□ -1.4
PDE6BP35913 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC6.3□□□□□ -1.4
PDE6BP35913 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
PDE6BP35913 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDE6BP35913 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.3□□□□□ -1.4
PDE6BP35913 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
PDE6BP35913 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PDE6BP35913 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
PDE6BP35913 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.3□□□□□ -1.4
PDE6BP35913 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.3□□□□□ -1.4
PDE6BP35913 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.3□□□□□ -1.4
PDE6BP35913 AC009962.1-201ENST00000567327 3813 ntBASIC6.3□□□□□ -1.4
PDE6BP35913 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
PDE6BP35913 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
PDE6BP35913 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDE6BP35913 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.29□□□□□ -1.4
PDE6BP35913 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
PDE6BP35913 RNY4P24-201ENST00000362735 96 ntBASIC6.29□□□□□ -1.4
PDE6BP35913 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDE6BP35913 Y_RNA.408-201ENST00000383987 102 ntBASIC6.29□□□□□ -1.4
PDE6BP35913 RNU6-532P-201ENST00000384318 107 ntBASIC6.29□□□□□ -1.4
PDE6BP35913 MIR589-201ENST00000385238 99 ntBASIC6.29□□□□□ -1.4
PDE6BP35913 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC6.29□□□□□ -1.4
PDE6BP35913 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.29□□□□□ -1.4
PDE6BP35913 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC6.29□□□□□ -1.4
PDE6BP35913 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.29□□□□□ -1.4
PDE6BP35913 AC022022.1-201ENST00000430304 178 ntBASIC6.29□□□□□ -1.4
PDE6BP35913 NOP56P2-201ENST00000447491 769 ntBASIC6.29□□□□□ -1.4
PDE6BP35913 AL050341.1-201ENST00000447743 313 ntBASIC6.29□□□□□ -1.4
PDE6BP35913 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.29□□□□□ -1.4
PDE6BP35913 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
PDE6BP35913 AC011979.1-201ENST00000472300 483 ntBASIC6.29□□□□□ -1.4
PDE6BP35913 AC109486.1-201ENST00000486833 374 ntBASIC6.29□□□□□ -1.4
PDE6BP35913 AC084024.2-201ENST00000503480 791 ntBASIC6.29□□□□□ -1.4
PDE6BP35913 CDH12P2-201ENST00000504393 298 ntBASIC6.29□□□□□ -1.4
PDE6BP35913 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDE6BP35913 AC106038.2-201ENST00000520706 568 ntBASIC6.29□□□□□ -1.4
PDE6BP35913 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDE6BP35913 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.29□□□□□ -1.4
PDE6BP35913 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
PDE6BP35913 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC6.29□□□□□ -1.4
PDE6BP35913 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC6.29□□□□□ -1.4
PDE6BP35913 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC6.29□□□□□ -1.4
PDE6BP35913 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.29□□□□□ -1.4
PDE6BP35913 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC6.29□□□□□ -1.4
PDE6BP35913 AC083899.3-201ENST00000603413 594 ntBASIC6.29□□□□□ -1.4
PDE6BP35913 AC020910.3-201ENST00000603701 874 ntBASIC6.29□□□□□ -1.4
PDE6BP35913 AC091805.2-201ENST00000603848 235 ntBASIC6.29□□□□□ -1.4
PDE6BP35913 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDE6BP35913 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.29□□□□□ -1.4
PDE6BP35913 AL158211.4-201ENST00000606988 584 ntBASIC6.29□□□□□ -1.4
PDE6BP35913 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDE6BP35913 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC6.29□□□□□ -1.4
PDE6BP35913 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC6.29□□□□□ -1.4
PDE6BP35913 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
PDE6BP35913 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
PDE6BP35913 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDE6BP35913 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDE6BP35913 TRIM51GP-201ENST00000534741 1350 ntBASIC6.29□□□□□ -1.4
PDE6BP35913 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
PDE6BP35913 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDE6BP35913 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.29□□□□□ -1.4
PDE6BP35913 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
PDE6BP35913 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDE6BP35913 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PDE6BP35913 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.28□□□□□ -1.4
PDE6BP35913 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.28□□□□□ -1.4
PDE6BP35913 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.28□□□□□ -1.4
PDE6BP35913 OR9G4-201ENST00000302957 984 ntBASIC6.28□□□□□ -1.4
PDE6BP35913 MIR133A2-201ENST00000347538 102 ntBASIC6.28□□□□□ -1.4
PDE6BP35913 RNA5SP453-201ENST00000362503 119 ntBASIC6.28□□□□□ -1.4
PDE6BP35913 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PDE6BP35913 RPL7P8-201ENST00000411964 730 ntBASIC6.28□□□□□ -1.4
PDE6BP35913 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC6.28□□□□□ -1.4
PDE6BP35913 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC6.28□□□□□ -1.4
PDE6BP35913 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC6.28□□□□□ -1.4
PDE6BP35913 AC093414.1-201ENST00000434712 514 ntBASIC6.28□□□□□ -1.4
PDE6BP35913 NDUFB4P8-201ENST00000435351 367 ntBASIC6.28□□□□□ -1.4
PDE6BP35913 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC6.28□□□□□ -1.4
PDE6BP35913 MTND3P1-201ENST00000441336 220 ntBASIC6.28□□□□□ -1.4
PDE6BP35913 TCEA1P1-201ENST00000449716 880 ntBASIC6.28□□□□□ -1.4
PDE6BP35913 KATNBL1P6-201ENST00000453433 915 ntBASIC6.28□□□□□ -1.4
PDE6BP35913 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.28□□□□□ -1.4
PDE6BP35913 ATP5A1P7-201ENST00000453978 1279 ntBASIC6.28□□□□□ -1.4
PDE6BP35913 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC6.28□□□□□ -1.4
PDE6BP35913 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC6.28□□□□□ -1.4
PDE6BP35913 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC6.28□□□□□ -1.4
PDE6BP35913 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.28□□□□□ -1.4
PDE6BP35913 HMGN1P9-201ENST00000515212 298 ntBASIC6.28□□□□□ -1.4
PDE6BP35913 RN7SKP276-201ENST00000516242 268 ntBASIC6.28□□□□□ -1.4
PDE6BP35913 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC6.28□□□□□ -1.4
PDE6BP35913 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.28□□□□□ -1.4
PDE6BP35913 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC6.28□□□□□ -1.4
PDE6BP35913 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC6.28□□□□□ -1.4
PDE6BP35913 AC009101.1-201ENST00000568135 242 ntBASIC6.28□□□□□ -1.4
PDE6BP35913 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC6.28□□□□□ -1.4
PDE6BP35913 AP005262.1-201ENST00000582646 997 ntBASIC6.28□□□□□ -1.4
PDE6BP35913 ABBA01006766.1-201ENST00000584728 294 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms