Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 AC005899.7-201ENST00000618199 588 ntBASIC6.69□□□□□ -1.34
ATP4AP20648 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
ATP4AP20648 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
ATP4AP20648 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
ATP4AP20648 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
ATP4AP20648 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
ATP4AP20648 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.69□□□□□ -1.34
ATP4AP20648 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.69□□□□□ -1.34
ATP4AP20648 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
ATP4AP20648 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
ATP4AP20648 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
ATP4AP20648 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.68□□□□□ -1.34
ATP4AP20648 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.68□□□□□ -1.34
ATP4AP20648 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.68□□□□□ -1.34
ATP4AP20648 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.68□□□□□ -1.34
ATP4AP20648 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ATP4AP20648 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC6.68□□□□□ -1.34
ATP4AP20648 AC027088.4-201ENST00000611559 1947 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.68□□□□□ -1.34
ATP4AP20648 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ATP4AP20648 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.68□□□□□ -1.34
ATP4AP20648 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
ATP4AP20648 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
ATP4AP20648 MIR369-201ENST00000362155 70 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 RNU6-1120P-201ENST00000362988 108 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 Y_RNA.133-201ENST00000363428 110 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 RNA5SP510-201ENST00000364697 99 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 RN7SKP78-201ENST00000364711 318 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
ATP4AP20648 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ATP4AP20648 AL121972.1-201ENST00000402023 252 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 SNRPEP6-201ENST00000407465 277 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 RNU2-39P-201ENST00000410604 198 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 AL596448.1-201ENST00000415024 392 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.68□□□□□ -1.34
ATP4AP20648 NMD3P2-201ENST00000421815 761 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 AL035660.1-201ENST00000422041 222 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 SETP9-201ENST00000423837 832 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.68□□□□□ -1.34
ATP4AP20648 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC6.68□□□□□ -1.34
ATP4AP20648 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.68□□□□□ -1.34
ATP4AP20648 RPS7P5-201ENST00000441482 581 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC6.68□□□□□ -1.34
ATP4AP20648 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC6.68□□□□□ -1.34
ATP4AP20648 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.68□□□□□ -1.34
ATP4AP20648 AP006222.1-205ENST00000450734 457 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 SDC4P-201ENST00000453285 601 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 MTND5P22-201ENST00000458380 195 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC6.68□□□□□ -1.34
ATP4AP20648 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ATP4AP20648 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.68□□□□□ -1.34
ATP4AP20648 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.68□□□□□ -1.34
ATP4AP20648 RNA5SP401-201ENST00000515920 127 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 RNU6-794P-201ENST00000517261 64 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.68□□□□□ -1.34
ATP4AP20648 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
ATP4AP20648 AC022861.1-201ENST00000522981 663 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.68□□□□□ -1.34
ATP4AP20648 PCNAP4-201ENST00000532690 730 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 PDCD5P1-201ENST00000543528 309 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 ARL6IP1P1-201ENST00000545836 610 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC6.68□□□□□ -1.34
ATP4AP20648 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC6.68□□□□□ -1.34
ATP4AP20648 MIR5186-201ENST00000577504 120 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 AC006270.2-201ENST00000578523 652 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 AC008521.2-201ENST00000591021 259 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
ATP4AP20648 VN1R107P-201ENST00000601784 209 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 7SK.7-201ENST00000603504 247 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 AC010591.1-201ENST00000603941 649 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 AC010680.4-201ENST00000605334 543 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.68□□□□□ -1.34
ATP4AP20648 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC6.68□□□□□ -1.34
ATP4AP20648 TTK-211ENST00000627129 240 ntTSL 5 BASIC6.68□□□□□ -1.34
ATP4AP20648 SRP54-214ENST00000630962 162 ntTSL 5 BASIC6.68□□□□□ -1.34
ATP4AP20648 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ATP4AP20648 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ATP4AP20648 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ATP4AP20648 DOCK11P1-201ENST00000553480 5932 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.68□□□□□ -1.34
ATP4AP20648 AC016583.1-201ENST00000624221 2431 ntBASIC6.68□□□□□ -1.34
ATP4AP20648 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
ATP4AP20648 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ATP4AP20648 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ATP4AP20648 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ATP4AP20648 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ATP4AP20648 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.67□□□□□ -1.34
ATP4AP20648 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.67□□□□□ -1.34
ATP4AP20648 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.67□□□□□ -1.34
ATP4AP20648 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.67□□□□□ -1.34
ATP4AP20648 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.67□□□□□ -1.34
ATP4AP20648 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.67□□□□□ -1.34
ATP4AP20648 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
ATP4AP20648 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
ATP4AP20648 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.67□□□□□ -1.34
ATP4AP20648 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
ATP4AP20648 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
ATP4AP20648 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
ATP4AP20648 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms