Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.45□□□□□ -1.54
COL6A2P12110 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.45□□□□□ -1.54
COL6A2P12110 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.45□□□□□ -1.54
COL6A2P12110 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC5.45□□□□□ -1.54
COL6A2P12110 AC018638.3-201ENST00000461273 132 ntBASIC5.45□□□□□ -1.54
COL6A2P12110 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.45□□□□□ -1.54
COL6A2P12110 RPS24P16-201ENST00000497294 392 ntBASIC5.45□□□□□ -1.54
COL6A2P12110 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL6A2P12110 POU5F1P7-201ENST00000508759 541 ntBASIC5.45□□□□□ -1.54
COL6A2P12110 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.45□□□□□ -1.54
COL6A2P12110 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.45□□□□□ -1.54
COL6A2P12110 AC016559.2-201ENST00000510759 359 ntBASIC5.45□□□□□ -1.54
COL6A2P12110 AC074344.1-201ENST00000512823 224 ntBASIC5.45□□□□□ -1.54
COL6A2P12110 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.45□□□□□ -1.54
COL6A2P12110 MRPS16P1-201ENST00000523462 412 ntBASIC5.45□□□□□ -1.54
COL6A2P12110 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.45□□□□□ -1.54
COL6A2P12110 AC022878.1-201ENST00000530684 149 ntBASIC5.45□□□□□ -1.54
COL6A2P12110 AP004247.1-201ENST00000531556 1289 ntBASIC5.45□□□□□ -1.54
COL6A2P12110 CBX3P7-201ENST00000532876 502 ntBASIC5.45□□□□□ -1.54
COL6A2P12110 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.45□□□□□ -1.54
COL6A2P12110 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5.45□□□□□ -1.54
COL6A2P12110 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.45□□□□□ -1.54
COL6A2P12110 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.45□□□□□ -1.54
COL6A2P12110 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.45□□□□□ -1.54
COL6A2P12110 AC090502.2-201ENST00000549267 280 ntBASIC5.45□□□□□ -1.54
COL6A2P12110 AL389895.1-201ENST00000554127 252 ntBASIC5.45□□□□□ -1.54
COL6A2P12110 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.45□□□□□ -1.54
COL6A2P12110 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.45□□□□□ -1.54
COL6A2P12110 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.45□□□□□ -1.54
COL6A2P12110 RN7SL290P-201ENST00000578661 300 ntBASIC5.45□□□□□ -1.54
COL6A2P12110 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.45□□□□□ -1.54
COL6A2P12110 AP001506.1-201ENST00000615444 211 ntBASIC5.45□□□□□ -1.54
COL6A2P12110 MIR1910-201ENST00000636955 80 ntBASIC5.45□□□□□ -1.54
COL6A2P12110 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.45□□□□□ -1.54
COL6A2P12110 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
COL6A2P12110 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
COL6A2P12110 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL6A2P12110 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.45□□□□□ -1.54
COL6A2P12110 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.45□□□□□ -1.54
COL6A2P12110 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL6A2P12110 AL078621.3-201ENST00000623707 2042 ntBASIC5.45□□□□□ -1.54
COL6A2P12110 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL6A2P12110 AL360270.2-201ENST00000562952 5985 ntBASIC5.45□□□□□ -1.54
COL6A2P12110 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL6A2P12110 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.44□□□□□ -1.54
COL6A2P12110 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL6A2P12110 TRIM51GP-201ENST00000534741 1350 ntBASIC5.44□□□□□ -1.54
COL6A2P12110 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
COL6A2P12110 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL6A2P12110 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
COL6A2P12110 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.44□□□□□ -1.54
COL6A2P12110 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL6A2P12110 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
COL6A2P12110 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL6A2P12110 Y_RNA.303-201ENST00000364998 94 ntBASIC5.44□□□□□ -1.54
COL6A2P12110 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
COL6A2P12110 MIR551A-201ENST00000385042 96 ntBASIC5.44□□□□□ -1.54
COL6A2P12110 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
COL6A2P12110 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL6A2P12110 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC5.44□□□□□ -1.54
COL6A2P12110 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC5.44□□□□□ -1.54
COL6A2P12110 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.44□□□□□ -1.54
COL6A2P12110 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.44□□□□□ -1.54
COL6A2P12110 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.44□□□□□ -1.54
COL6A2P12110 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.44□□□□□ -1.54
COL6A2P12110 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.44□□□□□ -1.54
COL6A2P12110 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC5.44□□□□□ -1.54
COL6A2P12110 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.44□□□□□ -1.54
COL6A2P12110 AC109583.1-201ENST00000432156 268 ntBASIC5.44□□□□□ -1.54
COL6A2P12110 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL6A2P12110 MTCO3P18-201ENST00000440206 761 ntBASIC5.44□□□□□ -1.54
COL6A2P12110 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.44□□□□□ -1.54
COL6A2P12110 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.44□□□□□ -1.54
COL6A2P12110 HMGN3P1-201ENST00000453847 193 ntBASIC5.44□□□□□ -1.54
COL6A2P12110 RPS15AP1-201ENST00000457423 391 ntBASIC5.44□□□□□ -1.54
COL6A2P12110 AC146507.1-201ENST00000468335 354 ntBASIC5.44□□□□□ -1.54
COL6A2P12110 AC109462.1-201ENST00000491087 368 ntBASIC5.44□□□□□ -1.54
COL6A2P12110 AL049874.2-201ENST00000492636 288 ntBASIC5.44□□□□□ -1.54
COL6A2P12110 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.44□□□□□ -1.54
COL6A2P12110 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.44□□□□□ -1.54
COL6A2P12110 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.44□□□□□ -1.54
COL6A2P12110 SNORA70.20-201ENST00000516848 126 ntBASIC5.44□□□□□ -1.54
COL6A2P12110 MTCO2P4-201ENST00000517968 247 ntBASIC5.44□□□□□ -1.54
COL6A2P12110 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.44□□□□□ -1.54
COL6A2P12110 OR5M7P-201ENST00000526140 972 ntBASIC5.44□□□□□ -1.54
COL6A2P12110 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.44□□□□□ -1.54
COL6A2P12110 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.44□□□□□ -1.54
COL6A2P12110 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.44□□□□□ -1.54
COL6A2P12110 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL6A2P12110 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.44□□□□□ -1.54
COL6A2P12110 AC115085.1-201ENST00000588924 229 ntBASIC5.44□□□□□ -1.54
COL6A2P12110 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.44□□□□□ -1.54
COL6A2P12110 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL6A2P12110 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL6A2P12110 AC108738.1-201ENST00000603703 237 ntBASIC5.44□□□□□ -1.54
COL6A2P12110 LARP7P1-201ENST00000605576 316 ntBASIC5.44□□□□□ -1.54
COL6A2P12110 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.44□□□□□ -1.54
COL6A2P12110 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
COL6A2P12110 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC5.44□□□□□ -1.54
COL6A2P12110 AC099654.14-201ENST00000638599 341 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 219.5 ms