Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.46□□□□□ -1.86
HLA-DPB1P04440 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.46□□□□□ -1.86
HLA-DPB1P04440 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.46□□□□□ -1.86
HLA-DPB1P04440 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.46□□□□□ -1.86
HLA-DPB1P04440 RPS7P7-201ENST00000463499 571 ntBASIC3.46□□□□□ -1.86
HLA-DPB1P04440 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
HLA-DPB1P04440 RN7SL385P-201ENST00000468873 276 ntBASIC3.46□□□□□ -1.86
HLA-DPB1P04440 TRBV12-2-201ENST00000489763 344 ntBASIC3.46□□□□□ -1.86
HLA-DPB1P04440 UBA52P3-201ENST00000491303 382 ntBASIC3.46□□□□□ -1.86
HLA-DPB1P04440 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.46□□□□□ -1.86
HLA-DPB1P04440 AC108120.2-201ENST00000512973 294 ntBASIC3.46□□□□□ -1.86
HLA-DPB1P04440 AC008802.1-201ENST00000519121 791 ntBASIC3.46□□□□□ -1.86
HLA-DPB1P04440 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.46□□□□□ -1.86
HLA-DPB1P04440 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DPB1P04440 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DPB1P04440 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.46□□□□□ -1.86
HLA-DPB1P04440 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DPB1P04440 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.46□□□□□ -1.86
HLA-DPB1P04440 PARP1P2-201ENST00000556806 195 ntBASIC3.46□□□□□ -1.86
HLA-DPB1P04440 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DPB1P04440 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DPB1P04440 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DPB1P04440 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DPB1P04440 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DPB1P04440 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.46□□□□□ -1.86
HLA-DPB1P04440 RNVU1-4-201ENST00000612985 164 ntBASIC3.46□□□□□ -1.86
HLA-DPB1P04440 AC003001.2-201ENST00000616294 831 ntBASIC3.46□□□□□ -1.86
HLA-DPB1P04440 AP004607.9-201ENST00000618202 316 ntBASIC3.46□□□□□ -1.86
HLA-DPB1P04440 MIR6810-201ENST00000622701 70 ntBASIC3.46□□□□□ -1.86
HLA-DPB1P04440 USP9YP4-201ENST00000424401 1745 ntBASIC3.46□□□□□ -1.86
HLA-DPB1P04440 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DPB1P04440 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.46□□□□□ -1.86
HLA-DPB1P04440 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
HLA-DPB1P04440 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DPB1P04440 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DPB1P04440 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DPB1P04440 PRO1804-201ENST00000623780 2050 ntBASIC3.45□□□□□ -1.86
HLA-DPB1P04440 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DPB1P04440 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
HLA-DPB1P04440 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DPB1P04440 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DPB1P04440 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.45□□□□□ -1.86
HLA-DPB1P04440 ENSAP1-201ENST00000392855 326 ntBASIC3.45□□□□□ -1.86
HLA-DPB1P04440 OR8G2P-201ENST00000412796 908 ntBASIC3.45□□□□□ -1.86
HLA-DPB1P04440 TPT1P2-201ENST00000413105 503 ntBASIC3.45□□□□□ -1.86
HLA-DPB1P04440 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.45□□□□□ -1.86
HLA-DPB1P04440 AC093698.1-201ENST00000423843 571 ntBASIC3.45□□□□□ -1.86
HLA-DPB1P04440 AC002075.2-201ENST00000425207 252 ntBASIC3.45□□□□□ -1.86
HLA-DPB1P04440 RSL24D1P6-201ENST00000426934 401 ntBASIC3.45□□□□□ -1.86
HLA-DPB1P04440 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DPB1P04440 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DPB1P04440 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DPB1P04440 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DPB1P04440 EXTL2P1-201ENST00000446218 416 ntBASIC3.45□□□□□ -1.86
HLA-DPB1P04440 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DPB1P04440 APOOP2-201ENST00000461561 539 ntBASIC3.45□□□□□ -1.86
HLA-DPB1P04440 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DPB1P04440 MTCO1P35-201ENST00000515270 228 ntBASIC3.45□□□□□ -1.86
HLA-DPB1P04440 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.45□□□□□ -1.86
HLA-DPB1P04440 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DPB1P04440 AC110743.1-201ENST00000584870 478 ntBASIC3.45□□□□□ -1.86
HLA-DPB1P04440 PSMA6P4-201ENST00000603247 718 ntBASIC3.45□□□□□ -1.86
HLA-DPB1P04440 AC090525.3-201ENST00000605601 189 ntBASIC3.45□□□□□ -1.86
HLA-DPB1P04440 AC090948.2-201ENST00000607363 564 ntBASIC3.45□□□□□ -1.86
HLA-DPB1P04440 AC055764.2-201ENST00000610089 670 ntBASIC3.45□□□□□ -1.86
HLA-DPB1P04440 MIR6867-201ENST00000610636 67 ntBASIC3.45□□□□□ -1.86
HLA-DPB1P04440 AC116447.1-201ENST00000613153 453 ntBASIC3.45□□□□□ -1.86
HLA-DPB1P04440 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.45□□□□□ -1.86
HLA-DPB1P04440 AL118508.4-201ENST00000624142 1176 ntBASIC3.45□□□□□ -1.86
HLA-DPB1P04440 AC112484.5-201ENST00000624189 228 ntBASIC3.45□□□□□ -1.86
HLA-DPB1P04440 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-DPB1P04440 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-DPB1P04440 OR6C71P-202ENST00000641886 1107 ntBASIC3.45□□□□□ -1.86
HLA-DPB1P04440 AC009501.3-201ENST00000605001 1352 ntBASIC3.45□□□□□ -1.86
HLA-DPB1P04440 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DPB1P04440 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DPB1P04440 RLIMP1-201ENST00000339626 1680 ntBASIC3.45□□□□□ -1.86
HLA-DPB1P04440 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
HLA-DPB1P04440 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DPB1P04440 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
HLA-DPB1P04440 ASNSP1-201ENST00000518311 1939 ntBASIC3.44□□□□□ -1.86
HLA-DPB1P04440 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DPB1P04440 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DPB1P04440 AC019155.1-201ENST00000382242 574 ntBASIC3.44□□□□□ -1.86
HLA-DPB1P04440 MIR3074-201ENST00000384885 81 ntBASIC3.44□□□□□ -1.86
HLA-DPB1P04440 RNA5SP317-201ENST00000410176 116 ntBASIC3.44□□□□□ -1.86
HLA-DPB1P04440 RNU4-6P-201ENST00000410804 122 ntBASIC3.44□□□□□ -1.86
HLA-DPB1P04440 RNA5SP311-201ENST00000411290 116 ntBASIC3.44□□□□□ -1.86
HLA-DPB1P04440 MTND4P11-201ENST00000417020 1058 ntBASIC3.44□□□□□ -1.86
HLA-DPB1P04440 AL356095.1-201ENST00000417217 199 ntBASIC3.44□□□□□ -1.86
HLA-DPB1P04440 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DPB1P04440 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.44□□□□□ -1.86
HLA-DPB1P04440 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DPB1P04440 MTND4LP7-201ENST00000431728 294 ntBASIC3.44□□□□□ -1.86
HLA-DPB1P04440 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.44□□□□□ -1.86
HLA-DPB1P04440 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DPB1P04440 RPS15AP29-201ENST00000445539 400 ntBASIC3.44□□□□□ -1.86
HLA-DPB1P04440 AC114755.5-201ENST00000447760 831 ntBASIC3.44□□□□□ -1.86
HLA-DPB1P04440 RPS11P1-201ENST00000451072 473 ntBASIC3.44□□□□□ -1.86
HLA-DPB1P04440 EIF4A1P11-201ENST00000451239 222 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms