Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 Y_RNA.164-201ENST00000363709 102 ntBASIC1.57□□□□□ -2.16
USH2AO75445 ATP6V0E1P4-201ENST00000427294 242 ntBASIC1.57□□□□□ -2.16
USH2AO75445 MYL8P-204ENST00000431574 518 ntBASIC1.57□□□□□ -2.16
USH2AO75445 RPL7P38-201ENST00000488396 739 ntBASIC1.57□□□□□ -2.16
USH2AO75445 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC1.57□□□□□ -2.16
USH2AO75445 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.57□□□□□ -2.16
USH2AO75445 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC1.57□□□□□ -2.16
USH2AO75445 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
USH2AO75445 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
USH2AO75445 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
USH2AO75445 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
USH2AO75445 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC1.57□□□□□ -2.16
USH2AO75445 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
USH2AO75445 AC090971.4-201ENST00000560291 1800 ntBASIC1.57□□□□□ -2.16
USH2AO75445 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC1.57□□□□□ -2.16
USH2AO75445 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
USH2AO75445 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
USH2AO75445 Y_RNA.796-201ENST00000364268 102 ntBASIC1.57□□□□□ -2.16
USH2AO75445 Y_RNA.269-201ENST00000364685 89 ntBASIC1.57□□□□□ -2.16
USH2AO75445 Y_RNA.799-201ENST00000364992 102 ntBASIC1.57□□□□□ -2.16
USH2AO75445 SNORA70B-201ENST00000384210 135 ntBASIC1.57□□□□□ -2.16
USH2AO75445 AC117434.1-201ENST00000419971 836 ntBASIC1.57□□□□□ -2.16
USH2AO75445 RPSAP41-201ENST00000439695 860 ntBASIC1.57□□□□□ -2.16
USH2AO75445 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.57□□□□□ -2.16
USH2AO75445 AL049874.2-201ENST00000492636 288 ntBASIC1.57□□□□□ -2.16
USH2AO75445 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC1.57□□□□□ -2.16
USH2AO75445 DEFB122-202ENST00000569013 197 ntBASIC1.57□□□□□ -2.16
USH2AO75445 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC1.57□□□□□ -2.16
USH2AO75445 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.57□□□□□ -2.16
USH2AO75445 AC015802.5-201ENST00000607478 399 ntBASIC1.57□□□□□ -2.16
USH2AO75445 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
USH2AO75445 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
USH2AO75445 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
USH2AO75445 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
USH2AO75445 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC1.57□□□□□ -2.16
USH2AO75445 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
USH2AO75445 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
USH2AO75445 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
USH2AO75445 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
USH2AO75445 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC1.57□□□□□ -2.16
USH2AO75445 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
USH2AO75445 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
USH2AO75445 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
USH2AO75445 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
USH2AO75445 AC062016.1-201ENST00000355719 319 ntBASIC1.57□□□□□ -2.16
USH2AO75445 AL138885.1-201ENST00000405921 675 ntBASIC1.57□□□□□ -2.16
USH2AO75445 AC007563.3-201ENST00000433233 371 ntBASIC1.57□□□□□ -2.16
USH2AO75445 AC140076.1-201ENST00000449897 361 ntBASIC1.57□□□□□ -2.16
USH2AO75445 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC1.57□□□□□ -2.16
USH2AO75445 AC093663.1-201ENST00000497190 394 ntBASIC1.57□□□□□ -2.16
USH2AO75445 AC124856.1-201ENST00000600819 896 ntBASIC1.57□□□□□ -2.16
USH2AO75445 OR6R2P-201ENST00000609216 300 ntBASIC1.57□□□□□ -2.16
USH2AO75445 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
USH2AO75445 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
USH2AO75445 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
USH2AO75445 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC1.57□□□□□ -2.16
USH2AO75445 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
USH2AO75445 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC1.57□□□□□ -2.16
USH2AO75445 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
USH2AO75445 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
USH2AO75445 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
USH2AO75445 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC1.57□□□□□ -2.16
USH2AO75445 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC1.57□□□□□ -2.16
USH2AO75445 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
USH2AO75445 PARD3-204ENST00000374768 799 ntTSL 3 BASIC1.57□□□□□ -2.16
USH2AO75445 LIPT1P1-201ENST00000415870 1186 ntBASIC1.57□□□□□ -2.16
USH2AO75445 NUP35P1-201ENST00000422734 947 ntBASIC1.57□□□□□ -2.16
USH2AO75445 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC1.57□□□□□ -2.16
USH2AO75445 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC1.57□□□□□ -2.16
USH2AO75445 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC1.57□□□□□ -2.16
USH2AO75445 AC241585.2-209ENST00000638217 143 ntBASIC1.57□□□□□ -2.16
USH2AO75445 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
USH2AO75445 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
USH2AO75445 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC1.57□□□□□ -2.16
USH2AO75445 AC006504.1-201ENST00000562493 3666 ntBASIC1.57□□□□□ -2.16
USH2AO75445 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
USH2AO75445 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
USH2AO75445 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC1.56□□□□□ -2.16
USH2AO75445 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC1.56□□□□□ -2.16
USH2AO75445 RPL7P24-201ENST00000493052 752 ntBASIC1.56□□□□□ -2.16
USH2AO75445 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC1.56□□□□□ -2.16
USH2AO75445 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC1.56□□□□□ -2.16
USH2AO75445 AP000873.5-201ENST00000533906 236 ntBASIC1.56□□□□□ -2.16
USH2AO75445 MAL2-203ENST00000534619 578 ntTSL 4 BASIC1.56□□□□□ -2.16
USH2AO75445 AC016839.1-201ENST00000578162 867 ntBASIC1.56□□□□□ -2.16
USH2AO75445 AC231759.1-201ENST00000616455 597 ntBASIC1.56□□□□□ -2.16
USH2AO75445 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.56□□□□□ -2.16
USH2AO75445 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
USH2AO75445 Z95327.2-201ENST00000414579 1873 ntBASIC1.56□□□□□ -2.16
USH2AO75445 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC1.56□□□□□ -2.16
USH2AO75445 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
USH2AO75445 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC1.56□□□□□ -2.16
USH2AO75445 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
USH2AO75445 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
USH2AO75445 RAP1BP1-201ENST00000412709 553 ntBASIC1.56□□□□□ -2.16
USH2AO75445 AC009963.1-201ENST00000417265 157 ntBASIC1.56□□□□□ -2.16
USH2AO75445 RPL23AP25-201ENST00000430973 463 ntBASIC1.56□□□□□ -2.16
USH2AO75445 HCG17-214ENST00000453558 732 ntTSL 5 BASIC1.56□□□□□ -2.16
USH2AO75445 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC1.56□□□□□ -2.16
USH2AO75445 RNA5SP164-201ENST00000516533 110 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms