Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 HMGB1P23-201ENST00000518743 568 ntBASIC3.97□□□□□ -1.77
RNF6Q9Y252 VTA1P2-201ENST00000520205 911 ntBASIC3.97□□□□□ -1.77
RNF6Q9Y252 AP003730.1-201ENST00000524605 285 ntBASIC3.97□□□□□ -1.77
RNF6Q9Y252 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.97□□□□□ -1.77
RNF6Q9Y252 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.97□□□□□ -1.77
RNF6Q9Y252 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.97□□□□□ -1.77
RNF6Q9Y252 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
RNF6Q9Y252 AC106785.1-201ENST00000565935 262 ntBASIC3.97□□□□□ -1.77
RNF6Q9Y252 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RNF6Q9Y252 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF6Q9Y252 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF6Q9Y252 MIR6891-201ENST00000618788 93 ntBASIC3.97□□□□□ -1.77
RNF6Q9Y252 AL445493.3-201ENST00000619568 477 ntBASIC3.97□□□□□ -1.77
RNF6Q9Y252 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF6Q9Y252 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.97□□□□□ -1.77
RNF6Q9Y252 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.97□□□□□ -1.77
RNF6Q9Y252 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.97□□□□□ -1.77
RNF6Q9Y252 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RNF6Q9Y252 MTND5P11-201ENST00000511037 1812 ntBASIC3.97□□□□□ -1.77
RNF6Q9Y252 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RNF6Q9Y252 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
RNF6Q9Y252 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
RNF6Q9Y252 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
RNF6Q9Y252 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RNF6Q9Y252 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RNF6Q9Y252 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RNF6Q9Y252 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
RNF6Q9Y252 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RNF6Q9Y252 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RNF6Q9Y252 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RNF6Q9Y252 AC008033.1-201ENST00000216407 1162 ntBASIC3.96□□□□□ -1.78
RNF6Q9Y252 AC025750.1-201ENST00000399891 379 ntBASIC3.96□□□□□ -1.78
RNF6Q9Y252 UBE2V1P11-201ENST00000411559 285 ntBASIC3.96□□□□□ -1.78
RNF6Q9Y252 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.96□□□□□ -1.78
RNF6Q9Y252 RAC1P3-201ENST00000416129 580 ntBASIC3.96□□□□□ -1.78
RNF6Q9Y252 AL391219.1-201ENST00000422570 483 ntBASIC3.96□□□□□ -1.78
RNF6Q9Y252 RPL23AP38-201ENST00000423801 469 ntBASIC3.96□□□□□ -1.78
RNF6Q9Y252 OR4C10P-201ENST00000434991 931 ntBASIC3.96□□□□□ -1.78
RNF6Q9Y252 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.96□□□□□ -1.78
RNF6Q9Y252 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.96□□□□□ -1.78
RNF6Q9Y252 RPL23AP89-201ENST00000439324 255 ntBASIC3.96□□□□□ -1.78
RNF6Q9Y252 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.96□□□□□ -1.78
RNF6Q9Y252 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.96□□□□□ -1.78
RNF6Q9Y252 HMGB1P16-201ENST00000447155 540 ntBASIC3.96□□□□□ -1.78
RNF6Q9Y252 AC006517.1-201ENST00000480485 328 ntBASIC3.96□□□□□ -1.78
RNF6Q9Y252 AC041039.1-201ENST00000485656 536 ntBASIC3.96□□□□□ -1.78
RNF6Q9Y252 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RNF6Q9Y252 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.96□□□□□ -1.78
RNF6Q9Y252 SLC25A15P5-201ENST00000508033 253 ntBASIC3.96□□□□□ -1.78
RNF6Q9Y252 MTND2P31-201ENST00000512602 616 ntBASIC3.96□□□□□ -1.78
RNF6Q9Y252 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.96□□□□□ -1.78
RNF6Q9Y252 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.96□□□□□ -1.78
RNF6Q9Y252 SNORD116-26-201ENST00000516006 96 ntBASIC3.96□□□□□ -1.78
RNF6Q9Y252 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.96□□□□□ -1.78
RNF6Q9Y252 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.96□□□□□ -1.78
RNF6Q9Y252 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.96□□□□□ -1.78
RNF6Q9Y252 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.96□□□□□ -1.78
RNF6Q9Y252 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.96□□□□□ -1.78
RNF6Q9Y252 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RNF6Q9Y252 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.96□□□□□ -1.78
RNF6Q9Y252 AC079148.1-201ENST00000565944 819 ntBASIC3.96□□□□□ -1.78
RNF6Q9Y252 AL360157.1-201ENST00000565962 87 ntBASIC3.96□□□□□ -1.78
RNF6Q9Y252 MIR4458-201ENST00000578872 75 ntBASIC3.96□□□□□ -1.78
RNF6Q9Y252 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.96□□□□□ -1.78
RNF6Q9Y252 AC079880.2-201ENST00000603790 1213 ntBASIC3.96□□□□□ -1.78
RNF6Q9Y252 AC113403.1-201ENST00000604910 193 ntBASIC3.96□□□□□ -1.78
RNF6Q9Y252 AL591034.3-201ENST00000605511 685 ntBASIC3.96□□□□□ -1.78
RNF6Q9Y252 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.96□□□□□ -1.78
RNF6Q9Y252 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.96□□□□□ -1.78
RNF6Q9Y252 AC083865.1-201ENST00000636634 831 ntBASIC3.96□□□□□ -1.78
RNF6Q9Y252 U6.107-201ENST00000637108 79 ntBASIC3.96□□□□□ -1.78
RNF6Q9Y252 AC017007.4-201ENST00000503353 1352 ntBASIC3.96□□□□□ -1.78
RNF6Q9Y252 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RNF6Q9Y252 AC074029.4-201ENST00000624796 1859 ntBASIC3.96□□□□□ -1.78
RNF6Q9Y252 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RNF6Q9Y252 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RNF6Q9Y252 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
RNF6Q9Y252 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
RNF6Q9Y252 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RNF6Q9Y252 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
RNF6Q9Y252 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
RNF6Q9Y252 AL592437.2-201ENST00000421655 2434 ntBASIC3.95□□□□□ -1.78
RNF6Q9Y252 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.95□□□□□ -1.78
RNF6Q9Y252 EIF2AP4-201ENST00000424793 1781 ntBASIC3.95□□□□□ -1.78
RNF6Q9Y252 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RNF6Q9Y252 AC134882.1-201ENST00000603738 1676 ntBASIC3.95□□□□□ -1.78
RNF6Q9Y252 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RNF6Q9Y252 MIR383-201ENST00000362257 73 ntBASIC3.95□□□□□ -1.78
RNF6Q9Y252 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF6Q9Y252 SNORA48.7-201ENST00000391302 135 ntBASIC3.95□□□□□ -1.78
RNF6Q9Y252 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.95□□□□□ -1.78
RNF6Q9Y252 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.95□□□□□ -1.78
RNF6Q9Y252 RBMY1KP-201ENST00000423480 476 ntBASIC3.95□□□□□ -1.78
RNF6Q9Y252 RPL30P3-201ENST00000424262 333 ntBASIC3.95□□□□□ -1.78
RNF6Q9Y252 MTATP6P11-201ENST00000428071 670 ntBASIC3.95□□□□□ -1.78
RNF6Q9Y252 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.95□□□□□ -1.78
RNF6Q9Y252 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.95□□□□□ -1.78
RNF6Q9Y252 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RNF6Q9Y252 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.95□□□□□ -1.78
RNF6Q9Y252 DHFRP3-201ENST00000455595 559 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms