Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 HMGB1P23-201ENST00000518743 568 ntBASIC4.93□□□□□ -1.62
USP29Q9HBJ7 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.93□□□□□ -1.62
USP29Q9HBJ7 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.93□□□□□ -1.62
USP29Q9HBJ7 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
USP29Q9HBJ7 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.93□□□□□ -1.62
USP29Q9HBJ7 AC021755.1-201ENST00000559747 1447 ntBASIC4.93□□□□□ -1.62
USP29Q9HBJ7 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.93□□□□□ -1.62
USP29Q9HBJ7 AC002400.1-201ENST00000569310 726 ntBASIC4.93□□□□□ -1.62
USP29Q9HBJ7 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.93□□□□□ -1.62
USP29Q9HBJ7 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.93□□□□□ -1.62
USP29Q9HBJ7 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.93□□□□□ -1.62
USP29Q9HBJ7 AC020910.3-201ENST00000603701 874 ntBASIC4.93□□□□□ -1.62
USP29Q9HBJ7 AC012557.2-201ENST00000605919 418 ntBASIC4.93□□□□□ -1.62
USP29Q9HBJ7 AC019193.2-201ENST00000610012 634 ntBASIC4.93□□□□□ -1.62
USP29Q9HBJ7 AC023158.2-201ENST00000614876 543 ntBASIC4.93□□□□□ -1.62
USP29Q9HBJ7 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.93□□□□□ -1.62
USP29Q9HBJ7 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.93□□□□□ -1.62
USP29Q9HBJ7 AC092608.3-201ENST00000625017 386 ntBASIC4.93□□□□□ -1.62
USP29Q9HBJ7 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
USP29Q9HBJ7 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
USP29Q9HBJ7 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
USP29Q9HBJ7 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.93□□□□□ -1.62
USP29Q9HBJ7 AP000776.1-201ENST00000530032 1663 ntBASIC4.92□□□□□ -1.62
USP29Q9HBJ7 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 AL359922.3-201ENST00000624779 1670 ntBASIC4.92□□□□□ -1.62
USP29Q9HBJ7 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 BTBD10P1-201ENST00000549824 1352 ntBASIC4.92□□□□□ -1.62
USP29Q9HBJ7 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 SGO1P2-201ENST00000429458 1589 ntBASIC4.92□□□□□ -1.62
USP29Q9HBJ7 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 FAM3C2-201ENST00000312214 681 ntBASIC4.92□□□□□ -1.62
USP29Q9HBJ7 BMS1P3-201ENST00000372011 932 ntBASIC4.92□□□□□ -1.62
USP29Q9HBJ7 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 AC119751.6-201ENST00000416712 186 ntBASIC4.92□□□□□ -1.62
USP29Q9HBJ7 LINC00993-201ENST00000420453 540 ntBASIC4.92□□□□□ -1.62
USP29Q9HBJ7 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 AC007435.1-201ENST00000421086 415 ntBASIC4.92□□□□□ -1.62
USP29Q9HBJ7 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 RPL7P44-201ENST00000424827 742 ntBASIC4.92□□□□□ -1.62
USP29Q9HBJ7 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 YWHAZP7-201ENST00000436906 631 ntBASIC4.92□□□□□ -1.62
USP29Q9HBJ7 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 ARL4AP3-201ENST00000441452 574 ntBASIC4.92□□□□□ -1.62
USP29Q9HBJ7 HMGB1P16-201ENST00000447155 540 ntBASIC4.92□□□□□ -1.62
USP29Q9HBJ7 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 CYCSP34-201ENST00000458172 304 ntBASIC4.92□□□□□ -1.62
USP29Q9HBJ7 RNU7-125P-201ENST00000458760 62 ntBASIC4.92□□□□□ -1.62
USP29Q9HBJ7 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 AC108751.2-201ENST00000469993 231 ntBASIC4.92□□□□□ -1.62
USP29Q9HBJ7 RPS3AP43-201ENST00000479743 781 ntBASIC4.92□□□□□ -1.62
USP29Q9HBJ7 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 RPF2P2-201ENST00000504693 896 ntBASIC4.92□□□□□ -1.62
USP29Q9HBJ7 AC073358.1-201ENST00000505671 684 ntBASIC4.92□□□□□ -1.62
USP29Q9HBJ7 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 RAB9BP1-201ENST00000519581 626 ntBASIC4.92□□□□□ -1.62
USP29Q9HBJ7 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 AP000619.3-201ENST00000535634 1127 ntBASIC4.92□□□□□ -1.62
USP29Q9HBJ7 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 ELOCP28-201ENST00000590044 317 ntBASIC4.92□□□□□ -1.62
USP29Q9HBJ7 BNIP3P26-201ENST00000600827 554 ntBASIC4.92□□□□□ -1.62
USP29Q9HBJ7 AL512782.1-201ENST00000603093 364 ntBASIC4.92□□□□□ -1.62
USP29Q9HBJ7 AC022509.4-201ENST00000621404 572 ntBASIC4.92□□□□□ -1.62
USP29Q9HBJ7 AC079248.2-201ENST00000623779 326 ntBASIC4.92□□□□□ -1.62
USP29Q9HBJ7 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 MIR4278-201ENST00000636094 69 ntBASIC4.92□□□□□ -1.62
USP29Q9HBJ7 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 OR51H2P-202ENST00000641424 3046 ntBASIC4.92□□□□□ -1.62
USP29Q9HBJ7 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
USP29Q9HBJ7 AC005332.5-201ENST00000591222 2919 ntBASIC4.92□□□□□ -1.62
USP29Q9HBJ7 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 SGO1P1-201ENST00000603525 1447 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 AC000123.3-201ENST00000624029 4975 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 AC079741.1-201ENST00000321498 212 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms