Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AL391358.1-201ENST00000605342 190 ntBASIC4.52□□□□□ -1.69
BRF2Q9HAW0 AC009159.2-201ENST00000617603 606 ntBASIC4.52□□□□□ -1.69
BRF2Q9HAW0 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.52□□□□□ -1.69
BRF2Q9HAW0 AC068870.2-201ENST00000620635 389 ntBASIC4.52□□□□□ -1.69
BRF2Q9HAW0 AC011330.2-201ENST00000621680 635 ntBASIC4.52□□□□□ -1.69
BRF2Q9HAW0 AL359757.1-201ENST00000623176 255 ntBASIC4.52□□□□□ -1.69
BRF2Q9HAW0 AF001550.2-201ENST00000636643 217 ntBASIC4.52□□□□□ -1.69
BRF2Q9HAW0 AL596275.2-204ENST00000641628 552 ntBASIC4.52□□□□□ -1.69
BRF2Q9HAW0 AL596275.2-206ENST00000641957 626 ntBASIC4.52□□□□□ -1.69
BRF2Q9HAW0 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
BRF2Q9HAW0 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
BRF2Q9HAW0 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.52□□□□□ -1.69
BRF2Q9HAW0 AC091046.3-201ENST00000631455 1574 ntBASIC4.52□□□□□ -1.69
BRF2Q9HAW0 ELL2P4-201ENST00000446870 1376 ntBASIC4.52□□□□□ -1.69
BRF2Q9HAW0 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 AC126323.6-202ENST00000568092 3511 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 SEPT7P7-201ENST00000420492 1301 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 AC109780.1-201ENST00000451768 1344 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 SSXP10-201ENST00000402595 565 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 FCF1P5-201ENST00000406490 482 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 AC069218.2-201ENST00000411665 344 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 AL591848.1-201ENST00000413092 322 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 HMGB1P49-201ENST00000418882 569 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 AC009237.2-201ENST00000421358 284 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 FABP7P1-201ENST00000424004 391 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 RPL36P19-201ENST00000430744 301 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 AC093155.1-201ENST00000440164 826 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 Z80107.2-201ENST00000445127 392 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 AC079168.2-201ENST00000453977 416 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 snoU13.20-201ENST00000459180 104 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 AC108734.3-201ENST00000481241 1165 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 AC005726.1-201ENST00000494679 427 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 RNF138P1-201ENST00000502765 546 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 AC098862.1-201ENST00000504991 413 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 RN7SKP234-201ENST00000517173 224 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 HMGB1P19-201ENST00000517578 577 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 AC026407.1-201ENST00000518369 204 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 MTND2P26-201ENST00000528255 1029 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 AC022882.1-201ENST00000532142 501 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 CENPUP2-201ENST00000555897 1186 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 AC090695.1-201ENST00000561269 1222 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 OR1F2P-201ENST00000570470 933 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 AC015912.2-201ENST00000571053 181 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 RN7SL753P-201ENST00000581238 290 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 HMGB2P1-201ENST00000591146 634 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 OR7E18P-201ENST00000592589 702 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 AP003117.2-201ENST00000606010 545 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 AC105429.2-201ENST00000610567 517 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 AC016769.4-201ENST00000616893 535 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 AC068722.2-201ENST00000618734 544 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 AP000676.4-201ENST00000624659 623 ntBASIC4.51□□□□□ -1.69
BRF2Q9HAW0 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
BRF2Q9HAW0 MAPK10-263ENST00000641052 4307 ntBASIC4.5□□□□□ -1.69
BRF2Q9HAW0 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
BRF2Q9HAW0 AC139713.2-215ENST00000641428 5037 ntBASIC4.5□□□□□ -1.69
BRF2Q9HAW0 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.5□□□□□ -1.69
BRF2Q9HAW0 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.5□□□□□ -1.69
BRF2Q9HAW0 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.5□□□□□ -1.69
BRF2Q9HAW0 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
BRF2Q9HAW0 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.5□□□□□ -1.69
BRF2Q9HAW0 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
BRF2Q9HAW0 RNU6-492P-201ENST00000363035 104 ntBASIC4.5□□□□□ -1.69
BRF2Q9HAW0 RN7SKP115-201ENST00000363177 317 ntBASIC4.5□□□□□ -1.69
BRF2Q9HAW0 RNU6-1243P-201ENST00000364028 107 ntBASIC4.5□□□□□ -1.69
BRF2Q9HAW0 RNU1-85P-201ENST00000364127 164 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms