Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LINC00346Q8IVM7 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
LINC00346Q8IVM7 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LINC00346Q8IVM7 LINC01355-201ENST00000566551 5444 ntBASIC4.22□□□□□ -1.73
LINC00346Q8IVM7 MAPK10-286ENST00000641208 8747 ntBASIC4.21□□□□□ -1.73
LINC00346Q8IVM7 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.73
LINC00346Q8IVM7 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.21□□□□□ -1.73
LINC00346Q8IVM7 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.73
LINC00346Q8IVM7 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
LINC00346Q8IVM7 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
LINC00346Q8IVM7 ZNF734P-201ENST00000419494 1534 ntBASIC4.21□□□□□ -1.73
LINC00346Q8IVM7 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 MTCYBP24-201ENST00000420387 1106 ntBASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 AL513175.2-201ENST00000422071 443 ntBASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 HSFY1P1-201ENST00000423928 1178 ntBASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 SKP1P3-201ENST00000429280 487 ntBASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 FABP7P2-201ENST00000429946 379 ntBASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 MTND2P5-201ENST00000432656 1006 ntBASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 LYPLA1P1-201ENST00000434514 622 ntBASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 AC093155.1-201ENST00000440164 826 ntBASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 TDGF1P1-201ENST00000445734 527 ntBASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 MTCO2P25-201ENST00000447065 681 ntBASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 SLC25A18P1-201ENST00000449385 454 ntBASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 PTGES3P5-201ENST00000455109 434 ntBASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 AC108751.2-201ENST00000469993 231 ntBASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 S100A11P1-201ENST00000477525 312 ntBASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 RNU2-30P-201ENST00000516209 141 ntBASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 MTND2P32-201ENST00000521584 1038 ntBASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 AP000619.3-201ENST00000535634 1127 ntBASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 GCSHP4-201ENST00000538792 439 ntBASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 AC133555.2-201ENST00000550213 292 ntBASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 SNORD39.3-201ENST00000584451 71 ntBASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 OR4G1P-201ENST00000588632 938 ntBASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 AP001521.2-201ENST00000608772 546 ntBASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 AC097505.1-201ENST00000610199 565 ntBASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 AC005332.6-201ENST00000613178 446 ntBASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 AP002799.1-201ENST00000623552 423 ntBASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 AC090897.3-201ENST00000636973 1157 ntBASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LINC00346Q8IVM7 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LINC00346Q8IVM7 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.2□□□□□ -1.74
LINC00346Q8IVM7 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LINC00346Q8IVM7 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
LINC00346Q8IVM7 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LINC00346Q8IVM7 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LINC00346Q8IVM7 SAMMSON-226ENST00000642089 1582 ntBASIC4.2□□□□□ -1.74
LINC00346Q8IVM7 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.2□□□□□ -1.74
LINC00346Q8IVM7 NACA3P-201ENST00000359690 648 ntBASIC4.2□□□□□ -1.74
LINC00346Q8IVM7 RNA5SP123-201ENST00000363244 119 ntBASIC4.2□□□□□ -1.74
LINC00346Q8IVM7 RNU1-83P-201ENST00000363426 164 ntBASIC4.2□□□□□ -1.74
LINC00346Q8IVM7 RNU4-92P-201ENST00000363783 136 ntBASIC4.2□□□□□ -1.74
LINC00346Q8IVM7 RN7SKP269-201ENST00000365545 319 ntBASIC4.2□□□□□ -1.74
LINC00346Q8IVM7 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
LINC00346Q8IVM7 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LINC00346Q8IVM7 RNU1-82P-201ENST00000390851 165 ntBASIC4.2□□□□□ -1.74
LINC00346Q8IVM7 U3.30-201ENST00000391308 210 ntBASIC4.2□□□□□ -1.74
LINC00346Q8IVM7 ATP5F1P2-201ENST00000398143 760 ntBASIC4.2□□□□□ -1.74
LINC00346Q8IVM7 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LINC00346Q8IVM7 ARL4AP5-201ENST00000404372 599 ntBASIC4.2□□□□□ -1.74
LINC00346Q8IVM7 AL355379.1-201ENST00000405542 640 ntBASIC4.2□□□□□ -1.74
LINC00346Q8IVM7 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.2□□□□□ -1.74
LINC00346Q8IVM7 RN7SKP213-201ENST00000410746 298 ntBASIC4.2□□□□□ -1.74
LINC00346Q8IVM7 RNU4-22P-201ENST00000411058 166 ntBASIC4.2□□□□□ -1.74
LINC00346Q8IVM7 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.2□□□□□ -1.74
LINC00346Q8IVM7 LUZP4P1-201ENST00000415420 344 ntBASIC4.2□□□□□ -1.74
LINC00346Q8IVM7 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.2□□□□□ -1.74
LINC00346Q8IVM7 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.2□□□□□ -1.74
LINC00346Q8IVM7 LINC00993-201ENST00000420453 540 ntBASIC4.2□□□□□ -1.74
LINC00346Q8IVM7 OFD1P18Y-201ENST00000420889 959 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms