Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 HAUS8P1-201ENST00000549005 542 ntBASIC7.44□□□□□ -1.22
RC3H1Q5TC82 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
RC3H1Q5TC82 AL161670.1-201ENST00000554348 137 ntBASIC7.44□□□□□ -1.22
RC3H1Q5TC82 AC007494.1-201ENST00000562293 760 ntBASIC7.44□□□□□ -1.22
RC3H1Q5TC82 AC020765.1-201ENST00000604296 328 ntBASIC7.44□□□□□ -1.22
RC3H1Q5TC82 AL359999.1-201ENST00000604513 294 ntBASIC7.44□□□□□ -1.22
RC3H1Q5TC82 AC097468.3-201ENST00000607956 456 ntBASIC7.44□□□□□ -1.22
RC3H1Q5TC82 AL451049.1-201ENST00000608672 497 ntBASIC7.44□□□□□ -1.22
RC3H1Q5TC82 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC7.44□□□□□ -1.22
RC3H1Q5TC82 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
RC3H1Q5TC82 TCL6_3.1-201ENST00000619064 137 ntBASIC7.44□□□□□ -1.22
RC3H1Q5TC82 CD86-204ENST00000469710 1604 ntTSL 2 BASIC7.44□□□□□ -1.22
RC3H1Q5TC82 UGT2B27P-201ENST00000505092 1620 ntBASIC7.44□□□□□ -1.22
RC3H1Q5TC82 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RC3H1Q5TC82 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RC3H1Q5TC82 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RC3H1Q5TC82 AC092447.10-201ENST00000620607 1652 ntBASIC7.44□□□□□ -1.22
RC3H1Q5TC82 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.44□□□□□ -1.22
RC3H1Q5TC82 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.44□□□□□ -1.22
RC3H1Q5TC82 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RC3H1Q5TC82 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RC3H1Q5TC82 AC025470.1-201ENST00000510053 2032 ntBASIC7.44□□□□□ -1.22
RC3H1Q5TC82 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RC3H1Q5TC82 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC7.43□□□□□ -1.22
RC3H1Q5TC82 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC7.43□□□□□ -1.22
RC3H1Q5TC82 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RC3H1Q5TC82 AC006378.2-201ENST00000623178 2476 ntBASIC7.43□□□□□ -1.22
RC3H1Q5TC82 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
RC3H1Q5TC82 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RC3H1Q5TC82 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RC3H1Q5TC82 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC7.43□□□□□ -1.22
RC3H1Q5TC82 RNU6-223P-201ENST00000362830 107 ntBASIC7.43□□□□□ -1.22
RC3H1Q5TC82 Y_RNA.149-201ENST00000363558 117 ntBASIC7.43□□□□□ -1.22
RC3H1Q5TC82 RN7SKP44-201ENST00000363602 316 ntBASIC7.43□□□□□ -1.22
RC3H1Q5TC82 Y_RNA.197-201ENST00000364004 102 ntBASIC7.43□□□□□ -1.22
RC3H1Q5TC82 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
RC3H1Q5TC82 SNORD115.1-201ENST00000391109 76 ntBASIC7.43□□□□□ -1.22
RC3H1Q5TC82 AL592114.1-201ENST00000403842 483 ntBASIC7.43□□□□□ -1.22
RC3H1Q5TC82 GAPDHP42-201ENST00000406848 981 ntBASIC7.43□□□□□ -1.22
RC3H1Q5TC82 MIR548I3-201ENST00000408378 149 ntBASIC7.43□□□□□ -1.22
RC3H1Q5TC82 MIR548I1-201ENST00000408810 149 ntBASIC7.43□□□□□ -1.22
RC3H1Q5TC82 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC7.43□□□□□ -1.22
RC3H1Q5TC82 MTATP6P18-201ENST00000417994 673 ntBASIC7.43□□□□□ -1.22
RC3H1Q5TC82 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC7.43□□□□□ -1.22
RC3H1Q5TC82 AL139148.1-201ENST00000427122 680 ntBASIC7.43□□□□□ -1.22
RC3H1Q5TC82 AC073335.1-201ENST00000427776 363 ntBASIC7.43□□□□□ -1.22
RC3H1Q5TC82 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC7.43□□□□□ -1.22
RC3H1Q5TC82 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RC3H1Q5TC82 CACYBPP1-201ENST00000438592 684 ntBASIC7.43□□□□□ -1.22
RC3H1Q5TC82 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC7.43□□□□□ -1.22
RC3H1Q5TC82 TCEA1P1-201ENST00000449716 880 ntBASIC7.43□□□□□ -1.22
RC3H1Q5TC82 MTND4P17-201ENST00000470444 350 ntBASIC7.43□□□□□ -1.22
RC3H1Q5TC82 OARD1-211ENST00000480585 829 ntTSL 3 BASIC7.43□□□□□ -1.22
RC3H1Q5TC82 HMGB3P15-201ENST00000507326 574 ntBASIC7.43□□□□□ -1.22
RC3H1Q5TC82 POU5F1P7-201ENST00000508759 541 ntBASIC7.43□□□□□ -1.22
RC3H1Q5TC82 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC7.43□□□□□ -1.22
RC3H1Q5TC82 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC7.43□□□□□ -1.22
RC3H1Q5TC82 SNRPGP18-201ENST00000553000 214 ntBASIC7.43□□□□□ -1.22
RC3H1Q5TC82 CYCSP2-201ENST00000558168 301 ntBASIC7.43□□□□□ -1.22
RC3H1Q5TC82 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
RC3H1Q5TC82 AC010525.2-201ENST00000590920 195 ntBASIC7.43□□□□□ -1.22
RC3H1Q5TC82 AP001330.4-201ENST00000604350 154 ntBASIC7.43□□□□□ -1.22
RC3H1Q5TC82 uc_338.26-201ENST00000612659 160 ntBASIC7.43□□□□□ -1.22
RC3H1Q5TC82 U2.22-201ENST00000636441 106 ntBASIC7.43□□□□□ -1.22
RC3H1Q5TC82 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.43□□□□□ -1.22
RC3H1Q5TC82 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
RC3H1Q5TC82 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
RC3H1Q5TC82 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RC3H1Q5TC82 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
RC3H1Q5TC82 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RC3H1Q5TC82 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.43□□□□□ -1.22
RC3H1Q5TC82 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RC3H1Q5TC82 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.43□□□□□ -1.22
RC3H1Q5TC82 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
RC3H1Q5TC82 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.43□□□□□ -1.22
RC3H1Q5TC82 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RC3H1Q5TC82 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.42□□□□□ -1.22
RC3H1Q5TC82 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.42□□□□□ -1.22
RC3H1Q5TC82 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RC3H1Q5TC82 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RC3H1Q5TC82 RNU6-216P-201ENST00000363282 104 ntBASIC7.42□□□□□ -1.22
RC3H1Q5TC82 SNORA63.7-201ENST00000365579 123 ntBASIC7.42□□□□□ -1.22
RC3H1Q5TC82 RNU6-308P-201ENST00000390957 107 ntBASIC7.42□□□□□ -1.22
RC3H1Q5TC82 AC068050.1-201ENST00000394891 380 ntBASIC7.42□□□□□ -1.22
RC3H1Q5TC82 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC7.42□□□□□ -1.22
RC3H1Q5TC82 NDUFB4P5-201ENST00000415445 361 ntBASIC7.42□□□□□ -1.22
RC3H1Q5TC82 AC009302.1-201ENST00000417147 390 ntBASIC7.42□□□□□ -1.22
RC3H1Q5TC82 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC7.42□□□□□ -1.22
RC3H1Q5TC82 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC7.42□□□□□ -1.22
RC3H1Q5TC82 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC7.42□□□□□ -1.22
RC3H1Q5TC82 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC7.42□□□□□ -1.22
RC3H1Q5TC82 RPL26P28-201ENST00000451325 435 ntBASIC7.42□□□□□ -1.22
RC3H1Q5TC82 RPS24P6-201ENST00000452670 400 ntBASIC7.42□□□□□ -1.22
RC3H1Q5TC82 HSPE1P22-201ENST00000456856 327 ntBASIC7.42□□□□□ -1.22
RC3H1Q5TC82 RN7SL172P-201ENST00000460535 303 ntBASIC7.42□□□□□ -1.22
RC3H1Q5TC82 AC090638.1-201ENST00000498296 909 ntBASIC7.42□□□□□ -1.22
RC3H1Q5TC82 AC138409.2-202ENST00000507274 458 ntBASIC7.42□□□□□ -1.22
RC3H1Q5TC82 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RC3H1Q5TC82 SNORD60.2-201ENST00000516883 86 ntBASIC7.42□□□□□ -1.22
RC3H1Q5TC82 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms