Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RSPO4Q2I0M5 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.99□□□□□ -1.45
RSPO4Q2I0M5 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.99□□□□□ -1.45
RSPO4Q2I0M5 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.99□□□□□ -1.45
RSPO4Q2I0M5 AC022882.1-201ENST00000532142 501 ntBASIC5.99□□□□□ -1.45
RSPO4Q2I0M5 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.99□□□□□ -1.45
RSPO4Q2I0M5 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.99□□□□□ -1.45
RSPO4Q2I0M5 POLR2KP1-201ENST00000553226 168 ntBASIC5.99□□□□□ -1.45
RSPO4Q2I0M5 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.99□□□□□ -1.45
RSPO4Q2I0M5 MIR4697-201ENST00000582977 78 ntBASIC5.99□□□□□ -1.45
RSPO4Q2I0M5 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.99□□□□□ -1.45
RSPO4Q2I0M5 AC004805.2-201ENST00000605382 482 ntBASIC5.99□□□□□ -1.45
RSPO4Q2I0M5 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.99□□□□□ -1.45
RSPO4Q2I0M5 OR2L1P-202ENST00000641567 1023 ntBASIC5.99□□□□□ -1.45
RSPO4Q2I0M5 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
RSPO4Q2I0M5 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
RSPO4Q2I0M5 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RSPO4Q2I0M5 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RSPO4Q2I0M5 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RSPO4Q2I0M5 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RSPO4Q2I0M5 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC5.99□□□□□ -1.45
RSPO4Q2I0M5 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RSPO4Q2I0M5 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RSPO4Q2I0M5 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.99□□□□□ -1.45
RSPO4Q2I0M5 SAMMSON-213ENST00000641336 1521 ntBASIC5.99□□□□□ -1.45
RSPO4Q2I0M5 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
RSPO4Q2I0M5 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 AC093278.2-201ENST00000564956 2485 ntBASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 RNA5SP394-201ENST00000364216 119 ntBASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 AL589647.1-201ENST00000402485 466 ntBASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 Y_RNA.615-201ENST00000410769 117 ntBASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 AC127391.1-201ENST00000411737 98 ntBASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 RPL31P12-201ENST00000422587 358 ntBASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 AC018865.2-201ENST00000423631 129 ntBASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 AL662874.1-201ENST00000426065 230 ntBASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 AL161722.2-201ENST00000434731 981 ntBASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 PRPF38AP2-201ENST00000438179 851 ntBASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 RPS12P17-201ENST00000438591 377 ntBASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 CYCSP51-201ENST00000443545 318 ntBASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 Y_RNA.653-201ENST00000459091 95 ntBASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 AC104687.2-201ENST00000604442 342 ntBASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 AC011626.1-201ENST00000604710 562 ntBASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 AC018889.1-201ENST00000605372 397 ntBASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 AL512329.2-201ENST00000607350 548 ntBASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 AL136131.3-201ENST00000607600 188 ntBASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 AC097468.3-201ENST00000607956 456 ntBASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 AC020634.1-201ENST00000608701 549 ntBASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 AL121612.2-201ENST00000612261 482 ntBASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 AL133173.2-201ENST00000614270 90 ntBASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 MKKS-204ENST00000639674 192 ntBASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 AC010329.1-201ENST00000593903 8328 ntBASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 NCOA4P3-201ENST00000513203 1877 ntBASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
RSPO4Q2I0M5 AL049641.1-201ENST00000441055 1948 ntBASIC5.97□□□□□ -1.45
RSPO4Q2I0M5 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms