Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 MIR4646-201ENST00000580775 63 ntBASIC4.27□□□□□ -1.73
SEC61A1P61619 MIR4691-201ENST00000583764 85 ntBASIC4.27□□□□□ -1.73
SEC61A1P61619 AP001981.2-201ENST00000603241 418 ntBASIC4.27□□□□□ -1.73
SEC61A1P61619 Mico1.1-201ENST00000611698 204 ntBASIC4.27□□□□□ -1.73
SEC61A1P61619 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.27□□□□□ -1.73
SEC61A1P61619 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SEC61A1P61619 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SEC61A1P61619 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.27□□□□□ -1.73
SEC61A1P61619 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SEC61A1P61619 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SEC61A1P61619 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
SEC61A1P61619 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.27□□□□□ -1.73
SEC61A1P61619 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SEC61A1P61619 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SEC61A1P61619 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.27□□□□□ -1.73
SEC61A1P61619 THAP12P4-201ENST00000528321 2266 ntBASIC4.26□□□□□ -1.73
SEC61A1P61619 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.26□□□□□ -1.73
SEC61A1P61619 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SEC61A1P61619 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SEC61A1P61619 DCAF13P3-201ENST00000561147 1334 ntBASIC4.26□□□□□ -1.73
SEC61A1P61619 AP000776.1-201ENST00000530032 1663 ntBASIC4.26□□□□□ -1.73
SEC61A1P61619 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SEC61A1P61619 OR56B2P-201ENST00000317102 954 ntBASIC4.26□□□□□ -1.73
SEC61A1P61619 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SEC61A1P61619 RN7SKP113-201ENST00000363891 295 ntBASIC4.26□□□□□ -1.73
SEC61A1P61619 RNU4-75P-201ENST00000364621 146 ntBASIC4.26□□□□□ -1.73
SEC61A1P61619 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SEC61A1P61619 Y_RNA.560-201ENST00000384689 102 ntBASIC4.26□□□□□ -1.73
SEC61A1P61619 MIR550A3-201ENST00000390735 95 ntBASIC4.26□□□□□ -1.73
SEC61A1P61619 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SEC61A1P61619 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SEC61A1P61619 RPS24P12-201ENST00000402084 394 ntBASIC4.26□□□□□ -1.73
SEC61A1P61619 SNORA11C-201ENST00000408532 129 ntBASIC4.26□□□□□ -1.73
SEC61A1P61619 AC002524.1-201ENST00000411687 547 ntBASIC4.26□□□□□ -1.73
SEC61A1P61619 AL139421.1-201ENST00000423010 169 ntBASIC4.26□□□□□ -1.73
SEC61A1P61619 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.26□□□□□ -1.73
SEC61A1P61619 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.26□□□□□ -1.73
SEC61A1P61619 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.26□□□□□ -1.73
SEC61A1P61619 DYNLL1P7-201ENST00000429273 258 ntBASIC4.26□□□□□ -1.73
SEC61A1P61619 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.26□□□□□ -1.73
SEC61A1P61619 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.26□□□□□ -1.73
SEC61A1P61619 YWHAZP7-201ENST00000436906 631 ntBASIC4.26□□□□□ -1.73
SEC61A1P61619 AL031663.1-201ENST00000437445 219 ntBASIC4.26□□□□□ -1.73
SEC61A1P61619 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.26□□□□□ -1.73
SEC61A1P61619 AL591503.2-201ENST00000442314 1005 ntBASIC4.26□□□□□ -1.73
SEC61A1P61619 AL360221.1-201ENST00000445989 335 ntBASIC4.26□□□□□ -1.73
SEC61A1P61619 HMGB1P16-201ENST00000447155 540 ntBASIC4.26□□□□□ -1.73
SEC61A1P61619 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.26□□□□□ -1.73
SEC61A1P61619 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.26□□□□□ -1.73
SEC61A1P61619 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.26□□□□□ -1.73
SEC61A1P61619 RN7SL817P-201ENST00000480777 288 ntBASIC4.26□□□□□ -1.73
SEC61A1P61619 AC073522.1-201ENST00000483312 377 ntBASIC4.26□□□□□ -1.73
SEC61A1P61619 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SEC61A1P61619 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.26□□□□□ -1.73
SEC61A1P61619 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.26□□□□□ -1.73
SEC61A1P61619 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.26□□□□□ -1.73
SEC61A1P61619 IGKV2-36-201ENST00000519999 223 ntBASIC4.26□□□□□ -1.73
SEC61A1P61619 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.26□□□□□ -1.73
SEC61A1P61619 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.26□□□□□ -1.73
SEC61A1P61619 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.26□□□□□ -1.73
SEC61A1P61619 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.26□□□□□ -1.73
SEC61A1P61619 IGJP1-201ENST00000522682 475 ntBASIC4.26□□□□□ -1.73
SEC61A1P61619 MIR3915-201ENST00000578518 97 ntBASIC4.26□□□□□ -1.73
SEC61A1P61619 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.26□□□□□ -1.73
SEC61A1P61619 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.26□□□□□ -1.73
SEC61A1P61619 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.26□□□□□ -1.73
SEC61A1P61619 AP005432.2-201ENST00000608162 586 ntBASIC4.26□□□□□ -1.73
SEC61A1P61619 AC103591.3-201ENST00000608684 209 ntBASIC4.26□□□□□ -1.73
SEC61A1P61619 AC073114.1-201ENST00000612027 490 ntBASIC4.26□□□□□ -1.73
SEC61A1P61619 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.26□□□□□ -1.73
SEC61A1P61619 AC121761.2-201ENST00000617300 689 ntBASIC4.26□□□□□ -1.73
SEC61A1P61619 AL607023.1-201ENST00000620045 248 ntBASIC4.26□□□□□ -1.73
SEC61A1P61619 AC006840.1-201ENST00000623069 542 ntBASIC4.26□□□□□ -1.73
SEC61A1P61619 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.26□□□□□ -1.73
SEC61A1P61619 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
SEC61A1P61619 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
SEC61A1P61619 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SEC61A1P61619 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.26□□□□□ -1.73
SEC61A1P61619 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SEC61A1P61619 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SEC61A1P61619 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SEC61A1P61619 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SEC61A1P61619 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.25□□□□□ -1.73
SEC61A1P61619 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SEC61A1P61619 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SEC61A1P61619 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
SEC61A1P61619 RNU6-623P-201ENST00000363143 105 ntBASIC4.25□□□□□ -1.73
SEC61A1P61619 RNU6-560P-201ENST00000364007 108 ntBASIC4.25□□□□□ -1.73
SEC61A1P61619 SNORA2.3-201ENST00000383920 135 ntBASIC4.25□□□□□ -1.73
SEC61A1P61619 MIR92A2-201ENST00000385299 75 ntBASIC4.25□□□□□ -1.73
SEC61A1P61619 RNA5SP372-201ENST00000390836 115 ntBASIC4.25□□□□□ -1.73
SEC61A1P61619 RN7SKP247-201ENST00000411094 308 ntBASIC4.25□□□□□ -1.73
SEC61A1P61619 NRBF2P2-201ENST00000413087 861 ntBASIC4.25□□□□□ -1.73
SEC61A1P61619 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.25□□□□□ -1.73
SEC61A1P61619 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.25□□□□□ -1.73
SEC61A1P61619 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.25□□□□□ -1.73
SEC61A1P61619 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.25□□□□□ -1.73
SEC61A1P61619 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.25□□□□□ -1.73
SEC61A1P61619 BX323845.1-201ENST00000432417 179 ntBASIC4.25□□□□□ -1.73
SEC61A1P61619 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms