Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CDC42P60953 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CDC42P60953 AL139811.1-201ENST00000424779 2299 ntBASIC3.4□□□□□ -1.87
CDC42P60953 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CDC42P60953 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.87
CDC42P60953 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CDC42P60953 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDC42P60953 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.39□□□□□ -1.87
CDC42P60953 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CDC42P60953 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CDC42P60953 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDC42P60953 AC073073.2-201ENST00000609827 2578 ntBASIC3.39□□□□□ -1.87
CDC42P60953 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.39□□□□□ -1.87
CDC42P60953 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CDC42P60953 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CDC42P60953 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.39□□□□□ -1.87
CDC42P60953 RNA5SP235-201ENST00000365411 114 ntBASIC3.39□□□□□ -1.87
CDC42P60953 RNA5SP167-201ENST00000365461 116 ntBASIC3.39□□□□□ -1.87
CDC42P60953 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.39□□□□□ -1.87
CDC42P60953 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CDC42P60953 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CDC42P60953 OSTCP5-201ENST00000425293 453 ntBASIC3.39□□□□□ -1.87
CDC42P60953 USP9YP31-201ENST00000431405 881 ntBASIC3.39□□□□□ -1.87
CDC42P60953 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.39□□□□□ -1.87
CDC42P60953 TBCAP1-201ENST00000436520 327 ntBASIC3.39□□□□□ -1.87
CDC42P60953 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.39□□□□□ -1.87
CDC42P60953 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.39□□□□□ -1.87
CDC42P60953 AC006539.3-201ENST00000454258 129 ntBASIC3.39□□□□□ -1.87
CDC42P60953 AC006463.2-201ENST00000473326 348 ntBASIC3.39□□□□□ -1.87
CDC42P60953 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.39□□□□□ -1.87
CDC42P60953 AC092451.1-201ENST00000480211 153 ntBASIC3.39□□□□□ -1.87
CDC42P60953 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.39□□□□□ -1.87
CDC42P60953 AC110792.1-201ENST00000491826 472 ntBASIC3.39□□□□□ -1.87
CDC42P60953 Vault.1-201ENST00000516474 102 ntBASIC3.39□□□□□ -1.87
CDC42P60953 RNU6-347P-201ENST00000516658 105 ntBASIC3.39□□□□□ -1.87
CDC42P60953 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.39□□□□□ -1.87
CDC42P60953 C1GALT1P3-201ENST00000522049 819 ntBASIC3.39□□□□□ -1.87
CDC42P60953 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CDC42P60953 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.39□□□□□ -1.87
CDC42P60953 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.39□□□□□ -1.87
CDC42P60953 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.39□□□□□ -1.87
CDC42P60953 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.39□□□□□ -1.87
CDC42P60953 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.39□□□□□ -1.87
CDC42P60953 AF001550.2-201ENST00000636643 217 ntBASIC3.39□□□□□ -1.87
CDC42P60953 MIR7153-201ENST00000637758 57 ntBASIC3.39□□□□□ -1.87
CDC42P60953 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CDC42P60953 SEPT7P7-201ENST00000420492 1301 ntBASIC3.39□□□□□ -1.87
CDC42P60953 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDC42P60953 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CDC42P60953 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.38□□□□□ -1.87
CDC42P60953 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CDC42P60953 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.38□□□□□ -1.87
CDC42P60953 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CDC42P60953 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDC42P60953 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CDC42P60953 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.38□□□□□ -1.87
CDC42P60953 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.38□□□□□ -1.87
CDC42P60953 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CDC42P60953 NDUFB1P1-201ENST00000435191 180 ntBASIC3.38□□□□□ -1.87
CDC42P60953 Z74696.2-201ENST00000436514 498 ntBASIC3.38□□□□□ -1.87
CDC42P60953 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.38□□□□□ -1.87
CDC42P60953 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.38□□□□□ -1.87
CDC42P60953 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.38□□□□□ -1.87
CDC42P60953 RPL23AP14-201ENST00000468281 468 ntBASIC3.38□□□□□ -1.87
CDC42P60953 HMGB3P14-201ENST00000494195 599 ntBASIC3.38□□□□□ -1.87
CDC42P60953 MGST2-204ENST00000506797 634 ntTSL 2 BASIC3.38□□□□□ -1.87
CDC42P60953 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.38□□□□□ -1.87
CDC42P60953 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.38□□□□□ -1.87
CDC42P60953 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.38□□□□□ -1.87
CDC42P60953 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.38□□□□□ -1.87
CDC42P60953 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CDC42P60953 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.38□□□□□ -1.87
CDC42P60953 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.38□□□□□ -1.87
CDC42P60953 VN1R81P-201ENST00000602085 372 ntBASIC3.38□□□□□ -1.87
CDC42P60953 SNORA62.6-201ENST00000606322 83 ntBASIC3.38□□□□□ -1.87
CDC42P60953 AL445567.2-201ENST00000618935 498 ntBASIC3.38□□□□□ -1.87
CDC42P60953 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.38□□□□□ -1.87
CDC42P60953 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.38□□□□□ -1.87
CDC42P60953 RIOK3P1-201ENST00000418778 1528 ntBASIC3.38□□□□□ -1.87
CDC42P60953 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.38□□□□□ -1.87
CDC42P60953 AF127577.6-201ENST00000623352 2191 ntBASIC3.38□□□□□ -1.87
CDC42P60953 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CDC42P60953 SPATA2P1-201ENST00000431223 2055 ntBASIC3.37□□□□□ -1.87
CDC42P60953 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDC42P60953 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDC42P60953 ASNSP1-204ENST00000641977 1664 ntBASIC3.37□□□□□ -1.87
CDC42P60953 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDC42P60953 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDC42P60953 RNU6-1331P-201ENST00000363658 106 ntBASIC3.37□□□□□ -1.87
CDC42P60953 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
CDC42P60953 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDC42P60953 RPS27AP11-201ENST00000402798 447 ntBASIC3.37□□□□□ -1.87
CDC42P60953 ZNF602P-201ENST00000405929 924 ntBASIC3.37□□□□□ -1.87
CDC42P60953 MTHFD2P2-201ENST00000407725 247 ntBASIC3.37□□□□□ -1.87
CDC42P60953 RNU4-6P-201ENST00000410804 122 ntBASIC3.37□□□□□ -1.87
CDC42P60953 LIPT1P1-201ENST00000415870 1186 ntBASIC3.37□□□□□ -1.87
CDC42P60953 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDC42P60953 RPL17P36-201ENST00000420302 549 ntBASIC3.37□□□□□ -1.87
CDC42P60953 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDC42P60953 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms