Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 AC013404.1-201ENST00000413068 249 ntBASIC4.8□□□□□ -1.64
HOXA11P31270 AC008173.1-201ENST00000418901 264 ntBASIC4.8□□□□□ -1.64
HOXA11P31270 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.8□□□□□ -1.64
HOXA11P31270 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXA11P31270 RPL36AP10-201ENST00000421785 322 ntBASIC4.8□□□□□ -1.64
HOXA11P31270 UBE2V1P1-201ENST00000430836 445 ntBASIC4.8□□□□□ -1.64
HOXA11P31270 CDY12P-201ENST00000440679 1015 ntBASIC4.8□□□□□ -1.64
HOXA11P31270 GEMIN8P3-201ENST00000445417 720 ntBASIC4.8□□□□□ -1.64
HOXA11P31270 CDY13P-201ENST00000445813 1015 ntBASIC4.8□□□□□ -1.64
HOXA11P31270 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXA11P31270 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXA11P31270 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXA11P31270 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXA11P31270 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXA11P31270 RN7SL691P-201ENST00000494487 301 ntBASIC4.8□□□□□ -1.64
HOXA11P31270 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXA11P31270 RNA5SP497-201ENST00000516081 97 ntBASIC4.8□□□□□ -1.64
HOXA11P31270 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXA11P31270 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXA11P31270 AP003730.1-201ENST00000524605 285 ntBASIC4.8□□□□□ -1.64
HOXA11P31270 OR8I1P-201ENST00000529291 931 ntBASIC4.8□□□□□ -1.64
HOXA11P31270 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.8□□□□□ -1.64
HOXA11P31270 DUXAP6-201ENST00000553858 601 ntBASIC4.8□□□□□ -1.64
HOXA11P31270 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXA11P31270 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXA11P31270 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXA11P31270 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXA11P31270 AC011477.5-201ENST00000586571 259 ntBASIC4.8□□□□□ -1.64
HOXA11P31270 AC103792.1-201ENST00000603591 919 ntBASIC4.8□□□□□ -1.64
HOXA11P31270 AC245008.1-201ENST00000608123 476 ntBASIC4.8□□□□□ -1.64
HOXA11P31270 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXA11P31270 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.8□□□□□ -1.64
HOXA11P31270 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXA11P31270 PART1_2.1-201ENST00000612397 250 ntBASIC4.8□□□□□ -1.64
HOXA11P31270 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXA11P31270 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.8□□□□□ -1.64
HOXA11P31270 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXA11P31270 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXA11P31270 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXA11P31270 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXA11P31270 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXA11P31270 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.8□□□□□ -1.64
HOXA11P31270 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXA11P31270 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
HOXA11P31270 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
HOXA11P31270 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA11P31270 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA11P31270 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXA11P31270 AC091046.3-201ENST00000631455 1574 ntBASIC4.79□□□□□ -1.64
HOXA11P31270 THAP12P5-201ENST00000405864 2275 ntBASIC4.79□□□□□ -1.64
HOXA11P31270 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA11P31270 AL672167.1-203ENST00000641299 2975 ntBASIC4.79□□□□□ -1.64
HOXA11P31270 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.79□□□□□ -1.64
HOXA11P31270 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.79□□□□□ -1.64
HOXA11P31270 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA11P31270 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA11P31270 RNU1-63P-201ENST00000383902 164 ntBASIC4.79□□□□□ -1.64
HOXA11P31270 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HOXA11P31270 AL583835.1-201ENST00000399570 407 ntBASIC4.79□□□□□ -1.64
HOXA11P31270 SKINT1L-201ENST00000401057 817 ntBASIC4.79□□□□□ -1.64
HOXA11P31270 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA11P31270 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA11P31270 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXA11P31270 PNRC2P1-201ENST00000423940 420 ntBASIC4.79□□□□□ -1.64
HOXA11P31270 GTF2IP2-201ENST00000424290 697 ntBASIC4.79□□□□□ -1.64
HOXA11P31270 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXA11P31270 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.79□□□□□ -1.64
HOXA11P31270 AC093422.3-201ENST00000428506 305 ntBASIC4.79□□□□□ -1.64
HOXA11P31270 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA11P31270 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.79□□□□□ -1.64
HOXA11P31270 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXA11P31270 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.79□□□□□ -1.64
HOXA11P31270 RSL24D1P3-201ENST00000449255 495 ntBASIC4.79□□□□□ -1.64
HOXA11P31270 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXA11P31270 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXA11P31270 RPL7P48-201ENST00000461513 746 ntBASIC4.79□□□□□ -1.64
HOXA11P31270 UQCRHP4-201ENST00000471686 272 ntBASIC4.79□□□□□ -1.64
HOXA11P31270 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXA11P31270 RPL23AP37-201ENST00000479658 549 ntBASIC4.79□□□□□ -1.64
HOXA11P31270 AL161747.1-201ENST00000480068 358 ntBASIC4.79□□□□□ -1.64
HOXA11P31270 AC105137.1-201ENST00000484355 562 ntBASIC4.79□□□□□ -1.64
HOXA11P31270 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXA11P31270 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXA11P31270 MTND1P22-201ENST00000510572 951 ntBASIC4.79□□□□□ -1.64
HOXA11P31270 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXA11P31270 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA11P31270 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXA11P31270 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXA11P31270 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXA11P31270 HAUS1P3-201ENST00000523909 662 ntBASIC4.79□□□□□ -1.64
HOXA11P31270 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXA11P31270 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXA11P31270 AL356057.1-201ENST00000533798 831 ntBASIC4.79□□□□□ -1.64
HOXA11P31270 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXA11P31270 ZNF971P-201ENST00000562068 1249 ntBASIC4.79□□□□□ -1.64
HOXA11P31270 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA11P31270 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXA11P31270 MIR4512-201ENST00000583257 77 ntBASIC4.79□□□□□ -1.64
HOXA11P31270 HMGB2P1-201ENST00000591146 634 ntBASIC4.79□□□□□ -1.64
HOXA11P31270 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms