Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LAMA1P25391 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
LAMA1P25391 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LAMA1P25391 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.28□□□□□ -1.88
LAMA1P25391 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
LAMA1P25391 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.28□□□□□ -1.88
LAMA1P25391 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LAMA1P25391 RNA5SP42-201ENST00000364278 115 ntBASIC3.28□□□□□ -1.88
LAMA1P25391 SNORA54-201ENST00000384281 123 ntBASIC3.28□□□□□ -1.88
LAMA1P25391 AL138885.1-201ENST00000405921 675 ntBASIC3.28□□□□□ -1.88
LAMA1P25391 AC010374.2-201ENST00000512933 535 ntBASIC3.28□□□□□ -1.88
LAMA1P25391 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.28□□□□□ -1.88
LAMA1P25391 AC087276.1-201ENST00000529659 480 ntBASIC3.28□□□□□ -1.88
LAMA1P25391 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.28□□□□□ -1.88
LAMA1P25391 MIR4769-201ENST00000584126 77 ntBASIC3.28□□□□□ -1.88
LAMA1P25391 AL713922.2-201ENST00000619384 716 ntBASIC3.28□□□□□ -1.88
LAMA1P25391 DDX6P1-205ENST00000441966 1436 ntBASIC3.28□□□□□ -1.88
LAMA1P25391 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
LAMA1P25391 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
LAMA1P25391 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
LAMA1P25391 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LAMA1P25391 RN7SKP97-201ENST00000410966 333 ntBASIC3.28□□□□□ -1.88
LAMA1P25391 AC063979.1-201ENST00000415539 377 ntBASIC3.28□□□□□ -1.88
LAMA1P25391 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.28□□□□□ -1.88
LAMA1P25391 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.28□□□□□ -1.88
LAMA1P25391 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.28□□□□□ -1.88
LAMA1P25391 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.28□□□□□ -1.88
LAMA1P25391 MIR2682-201ENST00000580305 110 ntBASIC3.28□□□□□ -1.88
LAMA1P25391 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.28□□□□□ -1.88
LAMA1P25391 CYCSP41-201ENST00000616920 296 ntBASIC3.28□□□□□ -1.88
LAMA1P25391 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
LAMA1P25391 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LAMA1P25391 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LAMA1P25391 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LAMA1P25391 AC004944.1-201ENST00000517807 3059 ntBASIC3.28□□□□□ -1.88
LAMA1P25391 AC007496.3-201ENST00000624987 3443 ntBASIC3.28□□□□□ -1.88
LAMA1P25391 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LAMA1P25391 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LAMA1P25391 AL136360.1-201ENST00000503377 1900 ntBASIC3.28□□□□□ -1.88
LAMA1P25391 CR383658.2-201ENST00000547576 1525 ntBASIC3.28□□□□□ -1.89
LAMA1P25391 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC3.28□□□□□ -1.89
LAMA1P25391 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
LAMA1P25391 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.28□□□□□ -1.89
LAMA1P25391 AC006028.1-201ENST00000438379 402 ntBASIC3.28□□□□□ -1.89
LAMA1P25391 HMGB1P5-202ENST00000451497 985 ntBASIC3.28□□□□□ -1.89
LAMA1P25391 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.28□□□□□ -1.89
LAMA1P25391 RPL7L1P13-201ENST00000511702 739 ntBASIC3.28□□□□□ -1.89
LAMA1P25391 EIF5A2P1-201ENST00000564027 460 ntBASIC3.28□□□□□ -1.89
LAMA1P25391 NRBF2P5-201ENST00000603087 788 ntBASIC3.28□□□□□ -1.89
LAMA1P25391 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.28□□□□□ -1.89
LAMA1P25391 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.28□□□□□ -1.89
LAMA1P25391 Z95114.1-201ENST00000624264 14574 ntBASIC3.28□□□□□ -1.89
LAMA1P25391 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
LAMA1P25391 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LAMA1P25391 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.27□□□□□ -1.89
LAMA1P25391 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
LAMA1P25391 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LAMA1P25391 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
LAMA1P25391 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LAMA1P25391 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LAMA1P25391 AL645568.2-201ENST00000432815 1337 ntBASIC3.27□□□□□ -1.89
LAMA1P25391 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LAMA1P25391 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.27□□□□□ -1.89
LAMA1P25391 SNORA48.8-201ENST00000391324 134 ntBASIC3.27□□□□□ -1.89
LAMA1P25391 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.27□□□□□ -1.89
LAMA1P25391 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.27□□□□□ -1.89
LAMA1P25391 RNA5SP103-201ENST00000459503 118 ntBASIC3.27□□□□□ -1.89
LAMA1P25391 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.27□□□□□ -1.89
LAMA1P25391 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.27□□□□□ -1.89
LAMA1P25391 BMS1P21-201ENST00000634565 365 ntBASIC3.27□□□□□ -1.89
LAMA1P25391 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.27□□□□□ -1.89
LAMA1P25391 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LAMA1P25391 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LAMA1P25391 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LAMA1P25391 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LAMA1P25391 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LAMA1P25391 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
LAMA1P25391 IL6-203ENST00000401651 539 ntTSL 2 BASIC3.27□□□□□ -1.89
LAMA1P25391 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.27□□□□□ -1.89
LAMA1P25391 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.27□□□□□ -1.89
LAMA1P25391 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.27□□□□□ -1.89
LAMA1P25391 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
LAMA1P25391 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LAMA1P25391 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
LAMA1P25391 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC3.26□□□□□ -1.89
LAMA1P25391 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LAMA1P25391 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
LAMA1P25391 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC3.26□□□□□ -1.89
LAMA1P25391 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.26□□□□□ -1.89
LAMA1P25391 RNU4-47P-201ENST00000410876 114 ntBASIC3.26□□□□□ -1.89
LAMA1P25391 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.26□□□□□ -1.89
LAMA1P25391 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.26□□□□□ -1.89
LAMA1P25391 BX890604.2-201ENST00000427883 474 ntBASIC3.26□□□□□ -1.89
LAMA1P25391 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.26□□□□□ -1.89
LAMA1P25391 AC108938.1-201ENST00000451204 136 ntBASIC3.26□□□□□ -1.89
LAMA1P25391 AC103783.1-201ENST00000520506 373 ntBASIC3.26□□□□□ -1.89
LAMA1P25391 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.26□□□□□ -1.89
LAMA1P25391 AC103881.1-201ENST00000603476 538 ntBASIC3.26□□□□□ -1.89
LAMA1P25391 AC026979.4-201ENST00000606555 645 ntBASIC3.26□□□□□ -1.89
LAMA1P25391 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 147.5 ms