Protein–RNA interactions for Protein: P20339

RAB5A, Ras-related protein Rab-5A, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5AP20339 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.17□□□□□ -1.9
RAB5AP20339 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC3.17□□□□□ -1.9
RAB5AP20339 AC007687.1-201ENST00000602704 304 ntBASIC3.17□□□□□ -1.9
RAB5AP20339 AL512329.2-201ENST00000607350 548 ntBASIC3.17□□□□□ -1.9
RAB5AP20339 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC3.17□□□□□ -1.9
RAB5AP20339 AC104307.1-201ENST00000616142 196 ntBASIC3.17□□□□□ -1.9
RAB5AP20339 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.17□□□□□ -1.9
RAB5AP20339 AP005264.7-201ENST00000625003 745 ntBASIC3.17□□□□□ -1.9
RAB5AP20339 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RAB5AP20339 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.17□□□□□ -1.9
RAB5AP20339 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.17□□□□□ -1.9
RAB5AP20339 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RAB5AP20339 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RAB5AP20339 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RAB5AP20339 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RAB5AP20339 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RAB5AP20339 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RAB5AP20339 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
RAB5AP20339 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RAB5AP20339 RNU6-1005P-201ENST00000384519 107 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.16□□□□□ -1.9
RAB5AP20339 AC069218.2-201ENST00000411665 344 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC3.16□□□□□ -1.9
RAB5AP20339 FAR2P2-201ENST00000413041 594 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 P2RY10P2-201ENST00000416730 913 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 AL513325.1-201ENST00000417716 1034 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.16□□□□□ -1.9
RAB5AP20339 AC140479.3-201ENST00000418944 1126 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 AC007394.1-201ENST00000421941 531 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.16□□□□□ -1.9
RAB5AP20339 AC068287.1-201ENST00000430283 295 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 AC005189.1-201ENST00000431286 310 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC3.16□□□□□ -1.9
RAB5AP20339 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.16□□□□□ -1.9
RAB5AP20339 AL513321.1-201ENST00000441175 761 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.16□□□□□ -1.9
RAB5AP20339 RPS27P5-201ENST00000444247 244 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 Z77249.1-201ENST00000444622 1175 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC3.16□□□□□ -1.9
RAB5AP20339 AL590399.6-201ENST00000446396 307 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 NPM1P49-201ENST00000448027 714 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
RAB5AP20339 RPL23AP15-201ENST00000450202 459 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 AC010733.1-201ENST00000451515 401 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 AL513343.1-201ENST00000451818 792 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 AURKAPS2-201ENST00000454983 333 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 CEACAMP4-201ENST00000457676 421 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 GAPDHP36-201ENST00000480688 918 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 AC078918.1-201ENST00000498515 228 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.16□□□□□ -1.9
RAB5AP20339 RN7SKP66-201ENST00000516681 231 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 AC083923.1-201ENST00000523708 376 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.16□□□□□ -1.9
RAB5AP20339 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.16□□□□□ -1.9
RAB5AP20339 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RAB5AP20339 AC008011.1-201ENST00000545989 227 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.16□□□□□ -1.9
RAB5AP20339 SERPINE4P-201ENST00000554978 281 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 AL109766.1-201ENST00000555080 552 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.16□□□□□ -1.9
RAB5AP20339 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.16□□□□□ -1.9
RAB5AP20339 AL845331.3-202ENST00000562856 261 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 AC233266.2-201ENST00000567067 528 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.16□□□□□ -1.9
RAB5AP20339 AC090312.2-201ENST00000582687 378 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.16□□□□□ -1.9
RAB5AP20339 AC010928.3-201ENST00000587712 541 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 AC125494.3-201ENST00000602759 455 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 AC006254.3-201ENST00000603353 884 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 AC009779.8-202ENST00000607990 932 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 AC004477.3-201ENST00000614061 590 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 MIR1264-201ENST00000616374 69 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 AC018816.2-201ENST00000621460 353 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 U3.53-201ENST00000628922 216 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
RAB5AP20339 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
RAB5AP20339 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.16□□□□□ -1.9
RAB5AP20339 ZNF137P-201ENST00000456718 1920 ntBASIC3.16□□□□□ -1.9
RAB5AP20339 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RAB5AP20339 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RAB5AP20339 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
RAB5AP20339 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.15□□□□□ -1.9
RAB5AP20339 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
RAB5AP20339 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
RAB5AP20339 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.15□□□□□ -1.9
RAB5AP20339 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.15□□□□□ -1.9
RAB5AP20339 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
RAB5AP20339 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RAB5AP20339 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC3.15□□□□□ -1.91
RAB5AP20339 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RAB5AP20339 OR3A2-201ENST00000408891 1076 ntBASIC3.15□□□□□ -1.91
RAB5AP20339 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC3.15□□□□□ -1.91
RAB5AP20339 SNORA57.3-201ENST00000411095 141 ntBASIC3.15□□□□□ -1.91
RAB5AP20339 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC3.15□□□□□ -1.91
RAB5AP20339 EIF1P3-201ENST00000423841 334 ntBASIC3.15□□□□□ -1.91
RAB5AP20339 PNRC2P1-201ENST00000423940 420 ntBASIC3.15□□□□□ -1.91
RAB5AP20339 MORF4L1P7-201ENST00000426038 703 ntBASIC3.15□□□□□ -1.91
RAB5AP20339 RPL23AP1-201ENST00000428990 471 ntBASIC3.15□□□□□ -1.91
RAB5AP20339 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.15□□□□□ -1.91
RAB5AP20339 AC245047.2-201ENST00000441060 530 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms