Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC005191.1-201ENST00000603950 358 ntBASIC4.83□□□□□ -1.64
EBF3Q9H4W6 AL133338.2-201ENST00000604292 736 ntBASIC4.83□□□□□ -1.64
EBF3Q9H4W6 Z82195.1-201ENST00000604558 398 ntBASIC4.83□□□□□ -1.64
EBF3Q9H4W6 OR2AS2P-201ENST00000606902 342 ntBASIC4.83□□□□□ -1.64
EBF3Q9H4W6 AL159169.2-201ENST00000610061 1269 ntBASIC4.83□□□□□ -1.64
EBF3Q9H4W6 AC245297.2-201ENST00000610119 565 ntBASIC4.83□□□□□ -1.64
EBF3Q9H4W6 AC005962.2-201ENST00000611427 652 ntBASIC4.83□□□□□ -1.64
EBF3Q9H4W6 AC067852.7-201ENST00000623270 535 ntBASIC4.83□□□□□ -1.64
EBF3Q9H4W6 RPL23AP61-201ENST00000623642 466 ntBASIC4.83□□□□□ -1.64
EBF3Q9H4W6 U3.53-201ENST00000628922 216 ntBASIC4.83□□□□□ -1.64
EBF3Q9H4W6 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.83□□□□□ -1.64
EBF3Q9H4W6 AC090897.3-201ENST00000636973 1157 ntBASIC4.83□□□□□ -1.64
EBF3Q9H4W6 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.83□□□□□ -1.64
EBF3Q9H4W6 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
EBF3Q9H4W6 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.83□□□□□ -1.64
EBF3Q9H4W6 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
EBF3Q9H4W6 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
EBF3Q9H4W6 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
EBF3Q9H4W6 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
EBF3Q9H4W6 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
EBF3Q9H4W6 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 SPATA2P1-201ENST00000431223 2055 ntBASIC4.82□□□□□ -1.64
EBF3Q9H4W6 RAD17P1-201ENST00000418130 2042 ntBASIC4.82□□□□□ -1.64
EBF3Q9H4W6 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 AC025263.3-201ENST00000622965 1396 ntBASIC4.82□□□□□ -1.64
EBF3Q9H4W6 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 AC007342.7-201ENST00000624610 2337 ntBASIC4.82□□□□□ -1.64
EBF3Q9H4W6 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 RNU1-94P-201ENST00000362627 173 ntBASIC4.82□□□□□ -1.64
EBF3Q9H4W6 RNU4-68P-201ENST00000364314 141 ntBASIC4.82□□□□□ -1.64
EBF3Q9H4W6 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 AL672167.2-201ENST00000377164 879 ntBASIC4.82□□□□□ -1.64
EBF3Q9H4W6 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 SNORA11-201ENST00000408789 128 ntBASIC4.82□□□□□ -1.64
EBF3Q9H4W6 RNU4-72P-201ENST00000410754 173 ntBASIC4.82□□□□□ -1.64
EBF3Q9H4W6 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 AC084290.1-201ENST00000434995 374 ntBASIC4.82□□□□□ -1.64
EBF3Q9H4W6 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 CBX1P1-201ENST00000440184 427 ntBASIC4.82□□□□□ -1.64
EBF3Q9H4W6 AC108463.1-201ENST00000450258 347 ntBASIC4.82□□□□□ -1.64
EBF3Q9H4W6 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 RPL5P13-201ENST00000462840 709 ntBASIC4.82□□□□□ -1.64
EBF3Q9H4W6 RPL6P9-201ENST00000466502 859 ntBASIC4.82□□□□□ -1.64
EBF3Q9H4W6 AC011276.1-201ENST00000469688 323 ntBASIC4.82□□□□□ -1.64
EBF3Q9H4W6 AC104763.1-201ENST00000475274 360 ntBASIC4.82□□□□□ -1.64
EBF3Q9H4W6 RPS3AP43-201ENST00000479743 781 ntBASIC4.82□□□□□ -1.64
EBF3Q9H4W6 RPL36AP41-201ENST00000493820 306 ntBASIC4.82□□□□□ -1.64
EBF3Q9H4W6 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 MTND2P26-201ENST00000528255 1029 ntBASIC4.82□□□□□ -1.64
EBF3Q9H4W6 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 AL358913.1-201ENST00000554342 121 ntBASIC4.82□□□□□ -1.64
EBF3Q9H4W6 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 AC135628.1-201ENST00000568867 534 ntBASIC4.82□□□□□ -1.64
EBF3Q9H4W6 MIR4675-201ENST00000577898 77 ntBASIC4.82□□□□□ -1.64
EBF3Q9H4W6 KPNA2P3-201ENST00000584190 848 ntBASIC4.82□□□□□ -1.64
EBF3Q9H4W6 AC008782.1-201ENST00000603386 430 ntBASIC4.82□□□□□ -1.64
EBF3Q9H4W6 AL133243.1-201ENST00000614487 366 ntBASIC4.82□□□□□ -1.64
EBF3Q9H4W6 AL121890.2-201ENST00000617644 465 ntBASIC4.82□□□□□ -1.64
EBF3Q9H4W6 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 OR8B1P-202ENST00000641132 1178 ntBASIC4.82□□□□□ -1.64
EBF3Q9H4W6 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 AC015813.6-201ENST00000624409 5808 ntBASIC4.82□□□□□ -1.64
EBF3Q9H4W6 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 AC108467.2-201ENST00000617640 1597 ntBASIC4.82□□□□□ -1.64
EBF3Q9H4W6 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
EBF3Q9H4W6 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 OR14L1P-202ENST00000641545 3009 ntBASIC4.81□□□□□ -1.64
EBF3Q9H4W6 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.81□□□□□ -1.64
EBF3Q9H4W6 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 CCT8P1-201ENST00000413611 1657 ntBASIC4.81□□□□□ -1.64
EBF3Q9H4W6 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
EBF3Q9H4W6 RNU5B-1-201ENST00000363286 116 ntBASIC4.81□□□□□ -1.64
EBF3Q9H4W6 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 156.2 ms