Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
BEST3Q8N1M1 SNORD113.2-201ENST00000364166 89 ntBASIC4.34□□□□□ -1.71
BEST3Q8N1M1 RNU6-619P-201ENST00000365146 108 ntBASIC4.34□□□□□ -1.71
BEST3Q8N1M1 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.34□□□□□ -1.71
BEST3Q8N1M1 SFR1P1-201ENST00000403720 688 ntBASIC4.34□□□□□ -1.71
BEST3Q8N1M1 GSTA8P-201ENST00000404253 637 ntBASIC4.34□□□□□ -1.71
BEST3Q8N1M1 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.34□□□□□ -1.71
BEST3Q8N1M1 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.34□□□□□ -1.71
BEST3Q8N1M1 C4BPAP2-201ENST00000428434 478 ntBASIC4.34□□□□□ -1.71
BEST3Q8N1M1 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.34□□□□□ -1.71
BEST3Q8N1M1 GTF2IP7-202ENST00000436677 309 ntBASIC4.34□□□□□ -1.71
BEST3Q8N1M1 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.34□□□□□ -1.71
BEST3Q8N1M1 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
BEST3Q8N1M1 AC002553.2-201ENST00000453217 340 ntBASIC4.34□□□□□ -1.71
BEST3Q8N1M1 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.34□□□□□ -1.71
BEST3Q8N1M1 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
BEST3Q8N1M1 AL445433.1-201ENST00000457507 257 ntBASIC4.34□□□□□ -1.71
BEST3Q8N1M1 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
BEST3Q8N1M1 RN7SL809P-201ENST00000482040 297 ntBASIC4.34□□□□□ -1.71
BEST3Q8N1M1 RPS27P23-201ENST00000487608 251 ntBASIC4.34□□□□□ -1.71
BEST3Q8N1M1 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.34□□□□□ -1.71
BEST3Q8N1M1 AC084024.2-201ENST00000503480 791 ntBASIC4.34□□□□□ -1.71
BEST3Q8N1M1 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.34□□□□□ -1.71
BEST3Q8N1M1 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.34□□□□□ -1.71
BEST3Q8N1M1 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.34□□□□□ -1.71
BEST3Q8N1M1 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.34□□□□□ -1.71
BEST3Q8N1M1 MRPS36P3-201ENST00000519284 130 ntBASIC4.34□□□□□ -1.71
BEST3Q8N1M1 AP001317.1-201ENST00000531194 960 ntBASIC4.34□□□□□ -1.71
BEST3Q8N1M1 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.34□□□□□ -1.71
BEST3Q8N1M1 MTND3P12-201ENST00000559068 328 ntBASIC4.34□□□□□ -1.71
BEST3Q8N1M1 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.34□□□□□ -1.71
BEST3Q8N1M1 AC022662.1-201ENST00000580252 331 ntBASIC4.34□□□□□ -1.71
BEST3Q8N1M1 MIR4715-201ENST00000584117 79 ntBASIC4.34□□□□□ -1.71
BEST3Q8N1M1 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.34□□□□□ -1.71
BEST3Q8N1M1 AC091057.2-201ENST00000602594 792 ntBASIC4.34□□□□□ -1.71
BEST3Q8N1M1 RPL26P30-202ENST00000602923 645 ntBASIC4.34□□□□□ -1.71
BEST3Q8N1M1 AC116447.1-201ENST00000613153 453 ntBASIC4.34□□□□□ -1.71
BEST3Q8N1M1 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.34□□□□□ -1.71
BEST3Q8N1M1 AC234782.5-201ENST00000617723 324 ntBASIC4.34□□□□□ -1.71
BEST3Q8N1M1 AP000484.1-201ENST00000620067 1252 ntBASIC4.34□□□□□ -1.71
BEST3Q8N1M1 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.34□□□□□ -1.71
BEST3Q8N1M1 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
BEST3Q8N1M1 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
BEST3Q8N1M1 ZNF876P-202ENST00000398732 1485 ntBASIC4.34□□□□□ -1.71
BEST3Q8N1M1 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
BEST3Q8N1M1 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
BEST3Q8N1M1 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
BEST3Q8N1M1 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
BEST3Q8N1M1 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.34□□□□□ -1.72
BEST3Q8N1M1 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
BEST3Q8N1M1 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
BEST3Q8N1M1 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.34□□□□□ -1.72
BEST3Q8N1M1 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
BEST3Q8N1M1 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 AL672167.1-205ENST00000641112 3080 ntBASIC4.33□□□□□ -1.72
BEST3Q8N1M1 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.33□□□□□ -1.72
BEST3Q8N1M1 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 AC009229.4-201ENST00000623854 1947 ntBASIC4.33□□□□□ -1.72
BEST3Q8N1M1 AL118496.1-201ENST00000440201 1812 ntBASIC4.33□□□□□ -1.72
BEST3Q8N1M1 AP005901.5-201ENST00000545779 1796 ntBASIC4.33□□□□□ -1.72
BEST3Q8N1M1 USP9YP4-201ENST00000424401 1745 ntBASIC4.33□□□□□ -1.72
BEST3Q8N1M1 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 AL136164.3-201ENST00000624429 3978 ntBASIC4.33□□□□□ -1.72
BEST3Q8N1M1 HMGB1P5-201ENST00000255320 642 ntBASIC4.33□□□□□ -1.72
BEST3Q8N1M1 SNORA71.2-201ENST00000364941 134 ntBASIC4.33□□□□□ -1.72
BEST3Q8N1M1 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 RNA5SP397-201ENST00000391323 118 ntBASIC4.33□□□□□ -1.72
BEST3Q8N1M1 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 NCSTNP1-201ENST00000406229 144 ntBASIC4.33□□□□□ -1.72
BEST3Q8N1M1 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 RAB28P1-201ENST00000411517 641 ntBASIC4.33□□□□□ -1.72
BEST3Q8N1M1 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 ELOCP9-201ENST00000418624 239 ntBASIC4.33□□□□□ -1.72
BEST3Q8N1M1 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 H2AFZP5-201ENST00000446960 382 ntBASIC4.33□□□□□ -1.72
BEST3Q8N1M1 HMGB1P16-201ENST00000447155 540 ntBASIC4.33□□□□□ -1.72
BEST3Q8N1M1 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 AC006511.1-201ENST00000470614 315 ntBASIC4.33□□□□□ -1.72
BEST3Q8N1M1 AC022795.1-201ENST00000473808 480 ntBASIC4.33□□□□□ -1.72
BEST3Q8N1M1 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 AC034244.1-201ENST00000507687 207 ntBASIC4.33□□□□□ -1.72
BEST3Q8N1M1 AC008885.2-201ENST00000509506 930 ntBASIC4.33□□□□□ -1.72
BEST3Q8N1M1 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.33□□□□□ -1.72
BEST3Q8N1M1 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 UBTFL10-201ENST00000528532 562 ntBASIC4.33□□□□□ -1.72
BEST3Q8N1M1 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.33□□□□□ -1.72
BEST3Q8N1M1 AC105129.1-201ENST00000560250 297 ntBASIC4.33□□□□□ -1.72
BEST3Q8N1M1 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms