Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 DHX40P1-201ENST00000588725 1412 ntBASIC7.5□□□□□ -1.21
VARS2Q5ST30 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
VARS2Q5ST30 AC009229.4-201ENST00000623854 1947 ntBASIC7.5□□□□□ -1.21
VARS2Q5ST30 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
VARS2Q5ST30 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
VARS2Q5ST30 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
VARS2Q5ST30 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.5□□□□□ -1.21
VARS2Q5ST30 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.5□□□□□ -1.21
VARS2Q5ST30 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
VARS2Q5ST30 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
VARS2Q5ST30 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.49□□□□□ -1.21
VARS2Q5ST30 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
VARS2Q5ST30 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
VARS2Q5ST30 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
VARS2Q5ST30 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
VARS2Q5ST30 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC7.49□□□□□ -1.21
VARS2Q5ST30 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
VARS2Q5ST30 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
VARS2Q5ST30 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.49□□□□□ -1.21
VARS2Q5ST30 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
VARS2Q5ST30 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
VARS2Q5ST30 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC7.49□□□□□ -1.21
VARS2Q5ST30 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
VARS2Q5ST30 snoU2_19.2-201ENST00000363024 80 ntBASIC7.49□□□□□ -1.21
VARS2Q5ST30 RNU6-1325P-201ENST00000364905 105 ntBASIC7.49□□□□□ -1.21
VARS2Q5ST30 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
VARS2Q5ST30 RNU6-641P-201ENST00000384006 107 ntBASIC7.49□□□□□ -1.21
VARS2Q5ST30 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
VARS2Q5ST30 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
VARS2Q5ST30 MIR1266-201ENST00000408125 84 ntBASIC7.49□□□□□ -1.21
VARS2Q5ST30 RNU6ATAC15P-201ENST00000408279 121 ntBASIC7.49□□□□□ -1.21
VARS2Q5ST30 RNU6-130P-201ENST00000411112 103 ntBASIC7.49□□□□□ -1.21
VARS2Q5ST30 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC7.49□□□□□ -1.21
VARS2Q5ST30 AL158071.1-201ENST00000430315 461 ntBASIC7.49□□□□□ -1.21
VARS2Q5ST30 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC7.49□□□□□ -1.21
VARS2Q5ST30 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.49□□□□□ -1.21
VARS2Q5ST30 AL390728.3-201ENST00000452704 270 ntBASIC7.49□□□□□ -1.21
VARS2Q5ST30 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC7.49□□□□□ -1.21
VARS2Q5ST30 AC016925.1-201ENST00000458303 298 ntBASIC7.49□□□□□ -1.21
VARS2Q5ST30 RN7SL492P-201ENST00000460700 295 ntBASIC7.49□□□□□ -1.21
VARS2Q5ST30 RN7SL160P-201ENST00000468558 284 ntBASIC7.49□□□□□ -1.21
VARS2Q5ST30 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC7.49□□□□□ -1.21
VARS2Q5ST30 RPL7P47-201ENST00000497299 556 ntBASIC7.49□□□□□ -1.21
VARS2Q5ST30 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC7.49□□□□□ -1.21
VARS2Q5ST30 AC146944.3-201ENST00000509969 371 ntBASIC7.49□□□□□ -1.21
VARS2Q5ST30 Y_RNA.719-201ENST00000517156 106 ntBASIC7.49□□□□□ -1.21
VARS2Q5ST30 IGLC4-201ENST00000517690 248 ntBASIC7.49□□□□□ -1.21
VARS2Q5ST30 ASB8-207ENST00000536953 923 ntTSL 2 BASIC7.49□□□□□ -1.21
VARS2Q5ST30 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
VARS2Q5ST30 AC013283.1-201ENST00000557282 492 ntBASIC7.49□□□□□ -1.21
VARS2Q5ST30 AC026458.1-201ENST00000564330 438 ntBASIC7.49□□□□□ -1.21
VARS2Q5ST30 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC7.49□□□□□ -1.21
VARS2Q5ST30 RACK1-235ENST00000626067 564 ntTSL 2 BASIC7.49□□□□□ -1.21
VARS2Q5ST30 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC7.49□□□□□ -1.21
VARS2Q5ST30 U6.114-201ENST00000636407 96 ntBASIC7.49□□□□□ -1.21
VARS2Q5ST30 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
VARS2Q5ST30 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC7.49□□□□□ -1.21
VARS2Q5ST30 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
VARS2Q5ST30 BX322639.1-202ENST00000423987 2213 ntBASIC7.49□□□□□ -1.21
VARS2Q5ST30 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC7.49□□□□□ -1.21
VARS2Q5ST30 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
VARS2Q5ST30 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.49□□□□□ -1.21
VARS2Q5ST30 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
VARS2Q5ST30 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
VARS2Q5ST30 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
VARS2Q5ST30 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
VARS2Q5ST30 AC104837.1-201ENST00000444644 1587 ntBASIC7.49□□□□□ -1.21
VARS2Q5ST30 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
VARS2Q5ST30 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
VARS2Q5ST30 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
VARS2Q5ST30 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
VARS2Q5ST30 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC7.49□□□□□ -1.21
VARS2Q5ST30 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC7.49□□□□□ -1.21
VARS2Q5ST30 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
VARS2Q5ST30 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
VARS2Q5ST30 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC7.48□□□□□ -1.21
VARS2Q5ST30 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
VARS2Q5ST30 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
VARS2Q5ST30 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
VARS2Q5ST30 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
VARS2Q5ST30 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.48□□□□□ -1.21
VARS2Q5ST30 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
VARS2Q5ST30 AC110716.2-201ENST00000563865 3945 ntBASIC7.48□□□□□ -1.21
VARS2Q5ST30 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.48□□□□□ -1.21
VARS2Q5ST30 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
VARS2Q5ST30 RNU6-1017P-201ENST00000363613 106 ntBASIC7.48□□□□□ -1.21
VARS2Q5ST30 Y_RNA.343-201ENST00000365354 112 ntBASIC7.48□□□□□ -1.21
VARS2Q5ST30 AC092634.1-201ENST00000366505 199 ntBASIC7.48□□□□□ -1.21
VARS2Q5ST30 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
VARS2Q5ST30 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
VARS2Q5ST30 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
VARS2Q5ST30 AL359643.1-201ENST00000404109 423 ntBASIC7.48□□□□□ -1.21
VARS2Q5ST30 RN7SKP91-201ENST00000410852 288 ntBASIC7.48□□□□□ -1.21
VARS2Q5ST30 RPL19P1-201ENST00000411635 428 ntBASIC7.48□□□□□ -1.21
VARS2Q5ST30 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC7.48□□□□□ -1.21
VARS2Q5ST30 AC083855.1-201ENST00000440041 258 ntBASIC7.48□□□□□ -1.21
VARS2Q5ST30 AL031681.1-201ENST00000443304 400 ntBASIC7.48□□□□□ -1.21
VARS2Q5ST30 SDHCP3-201ENST00000445371 506 ntBASIC7.48□□□□□ -1.21
VARS2Q5ST30 AC018638.3-201ENST00000461273 132 ntBASIC7.48□□□□□ -1.21
VARS2Q5ST30 AP001992.1-205ENST00000462248 379 ntBASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms