Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC069061.3-201ENST00000582254 823 ntBASIC6.98□□□□□ -1.29
CTC1Q2NKJ3 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.98□□□□□ -1.29
CTC1Q2NKJ3 MIR4701-201ENST00000583094 63 ntBASIC6.98□□□□□ -1.29
CTC1Q2NKJ3 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.98□□□□□ -1.29
CTC1Q2NKJ3 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.98□□□□□ -1.29
CTC1Q2NKJ3 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.98□□□□□ -1.29
CTC1Q2NKJ3 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC6.98□□□□□ -1.29
CTC1Q2NKJ3 SNORA17.5-201ENST00000630429 132 ntBASIC6.98□□□□□ -1.29
CTC1Q2NKJ3 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.98□□□□□ -1.29
CTC1Q2NKJ3 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.98□□□□□ -1.29
CTC1Q2NKJ3 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CTC1Q2NKJ3 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CTC1Q2NKJ3 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.98□□□□□ -1.29
CTC1Q2NKJ3 ERCC6-202ENST00000374127 1782 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 AC010615.1-201ENST00000594254 1764 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 AC090220.1-201ENST00000593078 1699 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 RPL23AP57-201ENST00000332361 466 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 RNU5E-1-201ENST00000362477 120 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 RNU6-216P-201ENST00000363282 104 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 RNU6-1339P-201ENST00000363574 91 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 RNU6-996P-201ENST00000365438 107 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 RNU6-662P-201ENST00000384253 104 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 RNU6-769P-201ENST00000384407 104 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 RNA5SP498-201ENST00000411342 120 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 AL451074.5-201ENST00000415894 435 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 SLC35E1P1-201ENST00000419313 864 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 RPS3P2-201ENST00000421346 701 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 AC079355.1-201ENST00000421770 223 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 RSL24D1P6-201ENST00000426934 401 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 BRWD1P3-201ENST00000428816 390 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 AC097463.1-201ENST00000447288 481 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 AL606490.1-201ENST00000452266 765 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 SLC25A51P1-201ENST00000468432 871 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 AC021205.1-201ENST00000468797 348 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 CR383656.1-201ENST00000484916 377 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 PPIAP19-201ENST00000486414 492 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 RN7SKP35-201ENST00000517210 151 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 IGKV3D-25-201ENST00000519599 235 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 EEF1B2P2-201ENST00000519625 676 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 AC022360.1-201ENST00000521058 340 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 OR5D2P-201ENST00000524390 911 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 AP001804.3-201ENST00000525146 880 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 SNORA70D-201ENST00000578836 135 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 AC008507.3-201ENST00000585753 472 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 MIR6768-201ENST00000610734 72 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 AC078880.4-201ENST00000617627 1749 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 AC007546.1-201ENST00000619452 559 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 AC073488.9-201ENST00000631601 754 ntBASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.97□□□□□ -1.29
CTC1Q2NKJ3 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
CTC1Q2NKJ3 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
CTC1Q2NKJ3 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
CTC1Q2NKJ3 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.96□□□□□ -1.29
CTC1Q2NKJ3 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
CTC1Q2NKJ3 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
CTC1Q2NKJ3 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.96□□□□□ -1.29
CTC1Q2NKJ3 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
CTC1Q2NKJ3 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
CTC1Q2NKJ3 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
CTC1Q2NKJ3 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
CTC1Q2NKJ3 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms