Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.55□□□□□ -1.68
CLDN2P57739 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN2P57739 AL031119.1-201ENST00000404707 1879 ntBASIC4.55□□□□□ -1.68
CLDN2P57739 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CLDN2P57739 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN2P57739 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN2P57739 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN2P57739 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN2P57739 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CLDN2P57739 AC107027.3-201ENST00000565095 3473 ntBASIC4.55□□□□□ -1.68
CLDN2P57739 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.55□□□□□ -1.68
CLDN2P57739 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN2P57739 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.54□□□□□ -1.68
CLDN2P57739 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.54□□□□□ -1.68
CLDN2P57739 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CLDN2P57739 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.54□□□□□ -1.68
CLDN2P57739 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
CLDN2P57739 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.54□□□□□ -1.68
CLDN2P57739 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.54□□□□□ -1.68
CLDN2P57739 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
CLDN2P57739 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN2P57739 RNA5SP509-201ENST00000364577 119 ntBASIC4.54□□□□□ -1.68
CLDN2P57739 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CLDN2P57739 MTND4P13-201ENST00000402078 1023 ntBASIC4.54□□□□□ -1.68
CLDN2P57739 GSTA8P-201ENST00000404253 637 ntBASIC4.54□□□□□ -1.68
CLDN2P57739 NCSTNP1-201ENST00000406229 144 ntBASIC4.54□□□□□ -1.68
CLDN2P57739 AL590084.1-201ENST00000407885 387 ntBASIC4.54□□□□□ -1.68
CLDN2P57739 RNU6-272P-201ENST00000411028 104 ntBASIC4.54□□□□□ -1.68
CLDN2P57739 RNU6-603P-201ENST00000411403 107 ntBASIC4.54□□□□□ -1.68
CLDN2P57739 AC234779.1-201ENST00000425910 285 ntBASIC4.54□□□□□ -1.68
CLDN2P57739 DPRXP1-201ENST00000426312 460 ntBASIC4.54□□□□□ -1.68
CLDN2P57739 RSL24D1P6-201ENST00000426934 401 ntBASIC4.54□□□□□ -1.68
CLDN2P57739 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.54□□□□□ -1.68
CLDN2P57739 MTCO1P54-201ENST00000430139 712 ntBASIC4.54□□□□□ -1.68
CLDN2P57739 NPM1P33-201ENST00000438918 872 ntBASIC4.54□□□□□ -1.68
CLDN2P57739 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN2P57739 Z77249.1-201ENST00000444622 1175 ntBASIC4.54□□□□□ -1.68
CLDN2P57739 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.54□□□□□ -1.68
CLDN2P57739 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN2P57739 RPS27AP15-201ENST00000447672 466 ntBASIC4.54□□□□□ -1.68
CLDN2P57739 AC079776.3-201ENST00000450665 370 ntBASIC4.54□□□□□ -1.68
CLDN2P57739 RPL23AP24-201ENST00000458203 385 ntBASIC4.54□□□□□ -1.68
CLDN2P57739 AC006511.1-201ENST00000470614 315 ntBASIC4.54□□□□□ -1.68
CLDN2P57739 AC104689.1-201ENST00000473356 768 ntBASIC4.54□□□□□ -1.68
CLDN2P57739 AC103987.1-201ENST00000473394 348 ntBASIC4.54□□□□□ -1.68
CLDN2P57739 AC068587.1-201ENST00000483613 781 ntBASIC4.54□□□□□ -1.68
CLDN2P57739 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.54□□□□□ -1.68
CLDN2P57739 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN2P57739 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN2P57739 RN7SKP122-201ENST00000515923 296 ntBASIC4.54□□□□□ -1.68
CLDN2P57739 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.54□□□□□ -1.68
CLDN2P57739 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.54□□□□□ -1.68
CLDN2P57739 OR4C2P-201ENST00000530855 1064 ntBASIC4.54□□□□□ -1.68
CLDN2P57739 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN2P57739 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.54□□□□□ -1.68
CLDN2P57739 AC090888.2-201ENST00000559765 1144 ntBASIC4.54□□□□□ -1.68
CLDN2P57739 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN2P57739 AC023575.1-201ENST00000580510 358 ntBASIC4.54□□□□□ -1.68
CLDN2P57739 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.54□□□□□ -1.68
CLDN2P57739 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.54□□□□□ -1.68
CLDN2P57739 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.54□□□□□ -1.68
CLDN2P57739 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.54□□□□□ -1.68
CLDN2P57739 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.54□□□□□ -1.68
CLDN2P57739 AC025811.1-201ENST00000604312 472 ntBASIC4.54□□□□□ -1.68
CLDN2P57739 AC092106.3-201ENST00000611308 722 ntBASIC4.54□□□□□ -1.68
CLDN2P57739 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN2P57739 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN2P57739 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.54□□□□□ -1.68
CLDN2P57739 AC015914.2-201ENST00000618167 288 ntBASIC4.54□□□□□ -1.68
CLDN2P57739 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CLDN2P57739 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.54□□□□□ -1.68
CLDN2P57739 AC015813.6-201ENST00000624409 5808 ntBASIC4.54□□□□□ -1.68
CLDN2P57739 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.54□□□□□ -1.68
CLDN2P57739 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
CLDN2P57739 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.54□□□□□ -1.68
CLDN2P57739 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.54□□□□□ -1.68
CLDN2P57739 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN2P57739 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.53□□□□□ -1.68
CLDN2P57739 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.53□□□□□ -1.68
CLDN2P57739 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN2P57739 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN2P57739 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.53□□□□□ -1.68
CLDN2P57739 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.53□□□□□ -1.68
CLDN2P57739 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.53□□□□□ -1.68
CLDN2P57739 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.53□□□□□ -1.68
CLDN2P57739 AC007435.1-201ENST00000421086 415 ntBASIC4.53□□□□□ -1.68
CLDN2P57739 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.53□□□□□ -1.68
CLDN2P57739 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.53□□□□□ -1.68
CLDN2P57739 USP9YP22-201ENST00000438971 294 ntBASIC4.53□□□□□ -1.68
CLDN2P57739 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.53□□□□□ -1.68
CLDN2P57739 HMGB1P48-201ENST00000446155 598 ntBASIC4.53□□□□□ -1.68
CLDN2P57739 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.53□□□□□ -1.68
CLDN2P57739 USP9YP25-201ENST00000457708 443 ntBASIC4.53□□□□□ -1.68
CLDN2P57739 AC011979.1-201ENST00000472300 483 ntBASIC4.53□□□□□ -1.68
CLDN2P57739 MTND2P14-201ENST00000482139 351 ntBASIC4.53□□□□□ -1.68
CLDN2P57739 NIP7P2-201ENST00000485801 544 ntBASIC4.53□□□□□ -1.68
CLDN2P57739 DYNLL1P6-201ENST00000503440 264 ntBASIC4.53□□□□□ -1.68
CLDN2P57739 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.53□□□□□ -1.68
CLDN2P57739 SNORA70.11-201ENST00000515987 138 ntBASIC4.53□□□□□ -1.68
CLDN2P57739 SNORA70.13-201ENST00000516116 138 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms