Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 RN7SKP53-201ENST00000411337 315 ntBASIC3.7□□□□□ -1.82
HMGA1P17096 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HMGA1P17096 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.7□□□□□ -1.82
HMGA1P17096 AC007967.1-201ENST00000455422 1159 ntBASIC3.7□□□□□ -1.82
HMGA1P17096 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.7□□□□□ -1.82
HMGA1P17096 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.7□□□□□ -1.82
HMGA1P17096 BTF3L4P4-201ENST00000506381 449 ntBASIC3.7□□□□□ -1.82
HMGA1P17096 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.7□□□□□ -1.82
HMGA1P17096 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.7□□□□□ -1.82
HMGA1P17096 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.7□□□□□ -1.82
HMGA1P17096 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
HMGA1P17096 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC3.7□□□□□ -1.82
HMGA1P17096 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.7□□□□□ -1.82
HMGA1P17096 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.7□□□□□ -1.82
HMGA1P17096 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.7□□□□□ -1.82
HMGA1P17096 AL122125.1-201ENST00000616999 600 ntBASIC3.7□□□□□ -1.82
HMGA1P17096 AP003355.3-201ENST00000623465 114 ntBASIC3.7□□□□□ -1.82
HMGA1P17096 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.7□□□□□ -1.82
HMGA1P17096 AC099654.11-201ENST00000638857 294 ntBASIC3.7□□□□□ -1.82
HMGA1P17096 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HMGA1P17096 MTND5P1-201ENST00000445440 1375 ntBASIC3.7□□□□□ -1.82
HMGA1P17096 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
HMGA1P17096 AL078595.2-201ENST00000605309 1780 ntBASIC3.7□□□□□ -1.82
HMGA1P17096 AC073346.2-201ENST00000624724 2058 ntBASIC3.7□□□□□ -1.82
HMGA1P17096 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.7□□□□□ -1.82
HMGA1P17096 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
HMGA1P17096 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.7□□□□□ -1.82
HMGA1P17096 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.7□□□□□ -1.82
HMGA1P17096 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC3.69□□□□□ -1.82
HMGA1P17096 AC018555.1-201ENST00000567548 1980 ntBASIC3.69□□□□□ -1.82
HMGA1P17096 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HMGA1P17096 OR52E6-202ENST00000379946 954 ntBASIC3.69□□□□□ -1.82
HMGA1P17096 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.69□□□□□ -1.82
HMGA1P17096 KRR1P1-201ENST00000419430 803 ntBASIC3.69□□□□□ -1.82
HMGA1P17096 AL158156.1-201ENST00000422509 473 ntBASIC3.69□□□□□ -1.82
HMGA1P17096 OSTCP5-201ENST00000425293 453 ntBASIC3.69□□□□□ -1.82
HMGA1P17096 RPL23AP83-201ENST00000434984 473 ntBASIC3.69□□□□□ -1.82
HMGA1P17096 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.69□□□□□ -1.82
HMGA1P17096 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.69□□□□□ -1.82
HMGA1P17096 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.69□□□□□ -1.82
HMGA1P17096 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.69□□□□□ -1.82
HMGA1P17096 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.69□□□□□ -1.82
HMGA1P17096 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.69□□□□□ -1.82
HMGA1P17096 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.69□□□□□ -1.82
HMGA1P17096 KLKP1-201ENST00000595979 403 ntBASIC3.69□□□□□ -1.82
HMGA1P17096 AL442067.2-201ENST00000614033 363 ntBASIC3.69□□□□□ -1.82
HMGA1P17096 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HMGA1P17096 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HMGA1P17096 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HMGA1P17096 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.69□□□□□ -1.82
HMGA1P17096 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
HMGA1P17096 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
HMGA1P17096 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
HMGA1P17096 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HMGA1P17096 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC3.68□□□□□ -1.82
HMGA1P17096 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
HMGA1P17096 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
HMGA1P17096 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HMGA1P17096 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
HMGA1P17096 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
HMGA1P17096 FRG1CP-201ENST00000358464 769 ntBASIC3.68□□□□□ -1.82
HMGA1P17096 RNA5SP42-201ENST00000364278 115 ntBASIC3.68□□□□□ -1.82
HMGA1P17096 HMGN2P8-201ENST00000391458 268 ntBASIC3.68□□□□□ -1.82
HMGA1P17096 U3.39-201ENST00000408569 239 ntBASIC3.68□□□□□ -1.82
HMGA1P17096 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.68□□□□□ -1.82
HMGA1P17096 MOB1AP1-201ENST00000430903 535 ntBASIC3.68□□□□□ -1.82
HMGA1P17096 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.68□□□□□ -1.82
HMGA1P17096 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.68□□□□□ -1.82
HMGA1P17096 DNAJC19P1-201ENST00000455312 319 ntBASIC3.68□□□□□ -1.82
HMGA1P17096 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
HMGA1P17096 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.68□□□□□ -1.82
HMGA1P17096 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.68□□□□□ -1.82
HMGA1P17096 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.68□□□□□ -1.82
HMGA1P17096 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.68□□□□□ -1.82
HMGA1P17096 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.68□□□□□ -1.82
HMGA1P17096 AC008489.1-201ENST00000524271 483 ntBASIC3.68□□□□□ -1.82
HMGA1P17096 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.68□□□□□ -1.82
HMGA1P17096 NCAPGP2-201ENST00000557911 754 ntBASIC3.68□□□□□ -1.82
HMGA1P17096 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.68□□□□□ -1.82
HMGA1P17096 AC115621.1-201ENST00000604653 858 ntBASIC3.68□□□□□ -1.82
HMGA1P17096 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.68□□□□□ -1.82
HMGA1P17096 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.68□□□□□ -1.82
HMGA1P17096 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.68□□□□□ -1.82
HMGA1P17096 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
HMGA1P17096 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HMGA1P17096 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.68□□□□□ -1.82
HMGA1P17096 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HMGA1P17096 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HMGA1P17096 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HMGA1P17096 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
HMGA1P17096 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
HMGA1P17096 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.67□□□□□ -1.82
HMGA1P17096 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HMGA1P17096 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.67□□□□□ -1.82
HMGA1P17096 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.67□□□□□ -1.82
HMGA1P17096 HSFY4P-201ENST00000415994 1181 ntBASIC3.67□□□□□ -1.82
HMGA1P17096 AC114814.2-201ENST00000419195 485 ntBASIC3.67□□□□□ -1.82
HMGA1P17096 MTND2P11-201ENST00000423638 648 ntBASIC3.67□□□□□ -1.82
HMGA1P17096 AC005300.1-201ENST00000428401 373 ntBASIC3.67□□□□□ -1.82
HMGA1P17096 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms