Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NID1P14543 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NID1P14543 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.99□□□□□ -1.45
NID1P14543 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.99□□□□□ -1.45
NID1P14543 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NID1P14543 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.99□□□□□ -1.45
NID1P14543 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NID1P14543 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NID1P14543 RNA5SP308-201ENST00000362532 115 ntBASIC5.99□□□□□ -1.45
NID1P14543 RNU5E-8P-201ENST00000363502 116 ntBASIC5.99□□□□□ -1.45
NID1P14543 RNU6-1188P-201ENST00000363795 107 ntBASIC5.99□□□□□ -1.45
NID1P14543 RNU4-7P-201ENST00000364758 141 ntBASIC5.99□□□□□ -1.45
NID1P14543 RNU6-1062P-201ENST00000383908 107 ntBASIC5.99□□□□□ -1.45
NID1P14543 Y_RNA.414-201ENST00000384011 101 ntBASIC5.99□□□□□ -1.45
NID1P14543 Y_RNA.530-201ENST00000384587 101 ntBASIC5.99□□□□□ -1.45
NID1P14543 SNORD94-201ENST00000386037 137 ntBASIC5.99□□□□□ -1.45
NID1P14543 RNU6ATAC23P-201ENST00000408448 123 ntBASIC5.99□□□□□ -1.45
NID1P14543 AC078974.1-201ENST00000411597 223 ntBASIC5.99□□□□□ -1.45
NID1P14543 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.99□□□□□ -1.45
NID1P14543 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.99□□□□□ -1.45
NID1P14543 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.99□□□□□ -1.45
NID1P14543 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.99□□□□□ -1.45
NID1P14543 AC015911.1-201ENST00000495111 156 ntBASIC5.99□□□□□ -1.45
NID1P14543 RPL19P11-201ENST00000495944 589 ntBASIC5.99□□□□□ -1.45
NID1P14543 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.99□□□□□ -1.45
NID1P14543 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.99□□□□□ -1.45
NID1P14543 RNU6-635P-201ENST00000516651 102 ntBASIC5.99□□□□□ -1.45
NID1P14543 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.99□□□□□ -1.45
NID1P14543 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.99□□□□□ -1.45
NID1P14543 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.99□□□□□ -1.45
NID1P14543 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC5.99□□□□□ -1.45
NID1P14543 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.99□□□□□ -1.45
NID1P14543 TVP23CP2-201ENST00000571473 623 ntBASIC5.99□□□□□ -1.45
NID1P14543 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.99□□□□□ -1.45
NID1P14543 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.99□□□□□ -1.45
NID1P14543 AL136097.3-201ENST00000611097 505 ntBASIC5.99□□□□□ -1.45
NID1P14543 AL157817.1-201ENST00000614264 790 ntBASIC5.99□□□□□ -1.45
NID1P14543 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.99□□□□□ -1.45
NID1P14543 U1.41-201ENST00000617626 165 ntBASIC5.99□□□□□ -1.45
NID1P14543 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
NID1P14543 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NID1P14543 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
NID1P14543 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NID1P14543 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NID1P14543 AC105749.1-201ENST00000631338 2008 ntBASIC5.99□□□□□ -1.45
NID1P14543 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
NID1P14543 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.99□□□□□ -1.45
NID1P14543 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
NID1P14543 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
NID1P14543 AC011493.1-201ENST00000596753 1632 ntBASIC5.99□□□□□ -1.45
NID1P14543 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC5.99□□□□□ -1.45
NID1P14543 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.99□□□□□ -1.45
NID1P14543 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.99□□□□□ -1.45
NID1P14543 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NID1P14543 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NID1P14543 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NID1P14543 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.98□□□□□ -1.45
NID1P14543 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
NID1P14543 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.98□□□□□ -1.45
NID1P14543 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.98□□□□□ -1.45
NID1P14543 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NID1P14543 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.98□□□□□ -1.45
NID1P14543 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
NID1P14543 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
NID1P14543 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NID1P14543 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NID1P14543 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
NID1P14543 AL033543.1-201ENST00000623440 13454 ntBASIC5.98□□□□□ -1.45
NID1P14543 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NID1P14543 AC007996.1-201ENST00000620414 2821 ntBASIC5.98□□□□□ -1.45
NID1P14543 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NID1P14543 RNA5SP140-201ENST00000364524 92 ntBASIC5.98□□□□□ -1.45
NID1P14543 Y_RNA.307-201ENST00000365022 117 ntBASIC5.98□□□□□ -1.45
NID1P14543 RNU4-66P-201ENST00000365199 138 ntBASIC5.98□□□□□ -1.45
NID1P14543 MRPS6P2-201ENST00000381143 370 ntBASIC5.98□□□□□ -1.45
NID1P14543 RNU6-952P-201ENST00000391164 108 ntBASIC5.98□□□□□ -1.45
NID1P14543 RPL31P52-201ENST00000407532 367 ntBASIC5.98□□□□□ -1.45
NID1P14543 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
NID1P14543 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.98□□□□□ -1.45
NID1P14543 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.98□□□□□ -1.45
NID1P14543 AC008267.5-201ENST00000424928 265 ntBASIC5.98□□□□□ -1.45
NID1P14543 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.98□□□□□ -1.45
NID1P14543 EEF1B2P3-201ENST00000447718 678 ntBASIC5.98□□□□□ -1.45
NID1P14543 RPS18P1-201ENST00000447840 458 ntBASIC5.98□□□□□ -1.45
NID1P14543 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NID1P14543 AC104308.1-201ENST00000454621 333 ntBASIC5.98□□□□□ -1.45
NID1P14543 MIR2053-201ENST00000459295 91 ntBASIC5.98□□□□□ -1.45
NID1P14543 AC104339.1-201ENST00000465478 348 ntBASIC5.98□□□□□ -1.45
NID1P14543 FTH1P9-201ENST00000513251 355 ntBASIC5.98□□□□□ -1.45
NID1P14543 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.98□□□□□ -1.45
NID1P14543 RNU6-789P-201ENST00000517105 102 ntBASIC5.98□□□□□ -1.45
NID1P14543 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.98□□□□□ -1.45
NID1P14543 IGKV2D-10-201ENST00000520194 281 ntBASIC5.98□□□□□ -1.45
NID1P14543 SUMO2P20-201ENST00000520803 283 ntBASIC5.98□□□□□ -1.45
NID1P14543 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.98□□□□□ -1.45
NID1P14543 AP005639.1-201ENST00000526939 192 ntBASIC5.98□□□□□ -1.45
NID1P14543 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.98□□□□□ -1.45
NID1P14543 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.98□□□□□ -1.45
NID1P14543 AC073916.1-201ENST00000545095 130 ntBASIC5.98□□□□□ -1.45
NID1P14543 AC092718.4-201ENST00000566639 716 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms