Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
UBL4AP11441 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.53□□□□□ -1.68
UBL4AP11441 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
UBL4AP11441 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
UBL4AP11441 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
UBL4AP11441 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.52□□□□□ -1.69
UBL4AP11441 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
UBL4AP11441 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
UBL4AP11441 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
UBL4AP11441 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.52□□□□□ -1.69
UBL4AP11441 SUGT1P1-201ENST00000379514 476 ntBASIC4.52□□□□□ -1.69
UBL4AP11441 AP002530.1-201ENST00000405705 684 ntBASIC4.52□□□□□ -1.69
UBL4AP11441 AL603766.1-201ENST00000407763 664 ntBASIC4.52□□□□□ -1.69
UBL4AP11441 MIR1178-201ENST00000408396 91 ntBASIC4.52□□□□□ -1.69
UBL4AP11441 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.52□□□□□ -1.69
UBL4AP11441 RPS3AP9-201ENST00000417027 792 ntBASIC4.52□□□□□ -1.69
UBL4AP11441 AC093162.1-201ENST00000419682 124 ntBASIC4.52□□□□□ -1.69
UBL4AP11441 BX510359.3-201ENST00000422168 306 ntBASIC4.52□□□□□ -1.69
UBL4AP11441 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.52□□□□□ -1.69
UBL4AP11441 RPL21P43-201ENST00000425440 472 ntBASIC4.52□□□□□ -1.69
UBL4AP11441 OR4F13P-201ENST00000428478 931 ntBASIC4.52□□□□□ -1.69
UBL4AP11441 AC005345.1-201ENST00000431868 217 ntBASIC4.52□□□□□ -1.69
UBL4AP11441 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.52□□□□□ -1.69
UBL4AP11441 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.52□□□□□ -1.69
UBL4AP11441 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.52□□□□□ -1.69
UBL4AP11441 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.52□□□□□ -1.69
UBL4AP11441 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
UBL4AP11441 RPL23AP2-201ENST00000471227 466 ntBASIC4.52□□□□□ -1.69
UBL4AP11441 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.52□□□□□ -1.69
UBL4AP11441 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
UBL4AP11441 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.52□□□□□ -1.69
UBL4AP11441 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.52□□□□□ -1.69
UBL4AP11441 AC093755.1-201ENST00000512950 1023 ntBASIC4.52□□□□□ -1.69
UBL4AP11441 RNA5SP249-201ENST00000516127 99 ntBASIC4.52□□□□□ -1.69
UBL4AP11441 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.52□□□□□ -1.69
UBL4AP11441 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.52□□□□□ -1.69
UBL4AP11441 AP001189.2-201ENST00000527320 189 ntBASIC4.52□□□□□ -1.69
UBL4AP11441 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.52□□□□□ -1.69
UBL4AP11441 HMGN2P6-201ENST00000551091 273 ntBASIC4.52□□□□□ -1.69
UBL4AP11441 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.52□□□□□ -1.69
UBL4AP11441 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.52□□□□□ -1.69
UBL4AP11441 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.52□□□□□ -1.69
UBL4AP11441 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.52□□□□□ -1.69
UBL4AP11441 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.52□□□□□ -1.69
UBL4AP11441 GTF2IP8-201ENST00000560687 584 ntBASIC4.52□□□□□ -1.69
UBL4AP11441 MTND3P19-201ENST00000603825 345 ntBASIC4.52□□□□□ -1.69
UBL4AP11441 OR6R2P-201ENST00000609216 300 ntBASIC4.52□□□□□ -1.69
UBL4AP11441 AC063944.3-201ENST00000609969 533 ntBASIC4.52□□□□□ -1.69
UBL4AP11441 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.52□□□□□ -1.69
UBL4AP11441 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.52□□□□□ -1.69
UBL4AP11441 AP002799.1-201ENST00000623552 423 ntBASIC4.52□□□□□ -1.69
UBL4AP11441 AC006963.1-201ENST00000624003 1052 ntBASIC4.52□□□□□ -1.69
UBL4AP11441 AL353662.3-201ENST00000625131 237 ntBASIC4.52□□□□□ -1.69
UBL4AP11441 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.52□□□□□ -1.69
UBL4AP11441 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
UBL4AP11441 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.52□□□□□ -1.69
UBL4AP11441 MFSD8-220ENST00000641243 1422 ntBASIC4.52□□□□□ -1.69
UBL4AP11441 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
UBL4AP11441 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.52□□□□□ -1.69
UBL4AP11441 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
UBL4AP11441 Z98755.1-201ENST00000407015 1384 ntBASIC4.52□□□□□ -1.69
UBL4AP11441 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
UBL4AP11441 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.51□□□□□ -1.69
UBL4AP11441 AC087190.4-201ENST00000574616 8334 ntBASIC4.51□□□□□ -1.69
UBL4AP11441 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
UBL4AP11441 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.51□□□□□ -1.69
UBL4AP11441 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.51□□□□□ -1.69
UBL4AP11441 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
UBL4AP11441 MIR448-201ENST00000362131 111 ntBASIC4.51□□□□□ -1.69
UBL4AP11441 RNA5SP305-201ENST00000362665 119 ntBASIC4.51□□□□□ -1.69
UBL4AP11441 RNU6-560P-201ENST00000364007 108 ntBASIC4.51□□□□□ -1.69
UBL4AP11441 RNU4-4P-201ENST00000364588 130 ntBASIC4.51□□□□□ -1.69
UBL4AP11441 AL136133.1-201ENST00000413694 376 ntBASIC4.51□□□□□ -1.69
UBL4AP11441 EIF4EP1-201ENST00000422311 642 ntBASIC4.51□□□□□ -1.69
UBL4AP11441 RPL7P44-201ENST00000424827 742 ntBASIC4.51□□□□□ -1.69
UBL4AP11441 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC4.51□□□□□ -1.69
UBL4AP11441 SKP1P3-201ENST00000429280 487 ntBASIC4.51□□□□□ -1.69
UBL4AP11441 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.51□□□□□ -1.69
UBL4AP11441 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.51□□□□□ -1.69
UBL4AP11441 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
UBL4AP11441 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.51□□□□□ -1.69
UBL4AP11441 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.51□□□□□ -1.69
UBL4AP11441 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.51□□□□□ -1.69
UBL4AP11441 MYO5BP2-201ENST00000449815 1277 ntBASIC4.51□□□□□ -1.69
UBL4AP11441 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
UBL4AP11441 AC005008.1-201ENST00000456151 612 ntBASIC4.51□□□□□ -1.69
UBL4AP11441 AC010307.1-201ENST00000467206 836 ntBASIC4.51□□□□□ -1.69
UBL4AP11441 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.51□□□□□ -1.69
UBL4AP11441 RN7SL177P-201ENST00000476596 299 ntBASIC4.51□□□□□ -1.69
UBL4AP11441 RN7SL97P-201ENST00000486780 299 ntBASIC4.51□□□□□ -1.69
UBL4AP11441 RPS4XP14-201ENST00000493072 781 ntBASIC4.51□□□□□ -1.69
UBL4AP11441 AC005726.1-201ENST00000494679 427 ntBASIC4.51□□□□□ -1.69
UBL4AP11441 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.51□□□□□ -1.69
UBL4AP11441 AC140172.1-201ENST00000502928 141 ntBASIC4.51□□□□□ -1.69
UBL4AP11441 MTCYBP16-201ENST00000509187 1129 ntBASIC4.51□□□□□ -1.69
UBL4AP11441 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.51□□□□□ -1.69
UBL4AP11441 AC092593.2-201ENST00000513866 913 ntBASIC4.51□□□□□ -1.69
UBL4AP11441 ENPP7P9-201ENST00000514456 627 ntBASIC4.51□□□□□ -1.69
UBL4AP11441 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.51□□□□□ -1.69
UBL4AP11441 AC027308.1-201ENST00000517993 110 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms