Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 H2AFZP6-201ENST00000444403 394 ntBASIC4.98□□□□□ -1.61
PROM1O43490 COX6CP2-201ENST00000444980 225 ntBASIC4.98□□□□□ -1.61
PROM1O43490 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.98□□□□□ -1.61
PROM1O43490 NPM1P49-201ENST00000448027 714 ntBASIC4.98□□□□□ -1.61
PROM1O43490 DDX39BP2-208ENST00000453923 258 ntBASIC4.98□□□□□ -1.61
PROM1O43490 AC091685.2-201ENST00000454924 864 ntBASIC4.98□□□□□ -1.61
PROM1O43490 CFTRP1-201ENST00000456646 183 ntBASIC4.98□□□□□ -1.61
PROM1O43490 PNPLA4P1-201ENST00000458328 305 ntBASIC4.98□□□□□ -1.61
PROM1O43490 CCDC75P1-201ENST00000469247 791 ntBASIC4.98□□□□□ -1.61
PROM1O43490 RN7SL814P-201ENST00000487715 300 ntBASIC4.98□□□□□ -1.61
PROM1O43490 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.98□□□□□ -1.61
PROM1O43490 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.98□□□□□ -1.61
PROM1O43490 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PROM1O43490 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.98□□□□□ -1.61
PROM1O43490 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.98□□□□□ -1.61
PROM1O43490 PGAM1P13-201ENST00000507497 754 ntBASIC4.98□□□□□ -1.61
PROM1O43490 ATP1B1P1-201ENST00000509767 915 ntBASIC4.98□□□□□ -1.61
PROM1O43490 AC016559.2-201ENST00000510759 359 ntBASIC4.98□□□□□ -1.61
PROM1O43490 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.98□□□□□ -1.61
PROM1O43490 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PROM1O43490 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.98□□□□□ -1.61
PROM1O43490 HMGN2P6-201ENST00000551091 273 ntBASIC4.98□□□□□ -1.61
PROM1O43490 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.98□□□□□ -1.61
PROM1O43490 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.98□□□□□ -1.61
PROM1O43490 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.98□□□□□ -1.61
PROM1O43490 AC022884.3-201ENST00000579571 248 ntBASIC4.98□□□□□ -1.61
PROM1O43490 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.98□□□□□ -1.61
PROM1O43490 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.98□□□□□ -1.61
PROM1O43490 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
PROM1O43490 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.98□□□□□ -1.61
PROM1O43490 AC069307.1-201ENST00000602820 447 ntBASIC4.98□□□□□ -1.61
PROM1O43490 PSMA6P4-201ENST00000603247 718 ntBASIC4.98□□□□□ -1.61
PROM1O43490 AC011626.1-201ENST00000604710 562 ntBASIC4.98□□□□□ -1.61
PROM1O43490 AL445222.1-201ENST00000607259 628 ntBASIC4.98□□□□□ -1.61
PROM1O43490 AC092794.1-201ENST00000612734 582 ntBASIC4.98□□□□□ -1.61
PROM1O43490 AC010678.1-201ENST00000614118 713 ntBASIC4.98□□□□□ -1.61
PROM1O43490 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.98□□□□□ -1.61
PROM1O43490 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PROM1O43490 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PROM1O43490 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
PROM1O43490 ZNF652P1-201ENST00000442420 1309 ntBASIC4.97□□□□□ -1.61
PROM1O43490 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.97□□□□□ -1.61
PROM1O43490 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.97□□□□□ -1.61
PROM1O43490 ASNSP1-201ENST00000518311 1939 ntBASIC4.97□□□□□ -1.61
PROM1O43490 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PROM1O43490 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.97□□□□□ -1.61
PROM1O43490 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PROM1O43490 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
PROM1O43490 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PROM1O43490 AC092747.4-201ENST00000620519 1861 ntBASIC4.97□□□□□ -1.61
PROM1O43490 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PROM1O43490 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
PROM1O43490 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
PROM1O43490 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PROM1O43490 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PROM1O43490 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
PROM1O43490 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
PROM1O43490 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PROM1O43490 Y_RNA.18-201ENST00000362461 102 ntBASIC4.97□□□□□ -1.61
PROM1O43490 SNORA4.1-201ENST00000364263 144 ntBASIC4.97□□□□□ -1.61
PROM1O43490 Y_RNA.311-201ENST00000365068 96 ntBASIC4.97□□□□□ -1.61
PROM1O43490 Y_RNA.359-201ENST00000365498 102 ntBASIC4.97□□□□□ -1.61
PROM1O43490 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PROM1O43490 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PROM1O43490 MIR589-201ENST00000385238 99 ntBASIC4.97□□□□□ -1.61
PROM1O43490 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.97□□□□□ -1.61
PROM1O43490 RNU2-42P-201ENST00000410697 113 ntBASIC4.97□□□□□ -1.61
PROM1O43490 RN7SKP247-201ENST00000411094 308 ntBASIC4.97□□□□□ -1.61
PROM1O43490 EIF4A1P3-201ENST00000411521 244 ntBASIC4.97□□□□□ -1.61
PROM1O43490 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.97□□□□□ -1.61
PROM1O43490 COX5BP7-201ENST00000414780 274 ntBASIC4.97□□□□□ -1.61
PROM1O43490 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.97□□□□□ -1.61
PROM1O43490 MTND4LP11-201ENST00000422184 280 ntBASIC4.97□□□□□ -1.61
PROM1O43490 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PROM1O43490 AP001324.1-201ENST00000428553 399 ntBASIC4.97□□□□□ -1.61
PROM1O43490 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.97□□□□□ -1.61
PROM1O43490 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.97□□□□□ -1.61
PROM1O43490 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.97□□□□□ -1.61
PROM1O43490 MTND1P4-201ENST00000435196 415 ntBASIC4.97□□□□□ -1.61
PROM1O43490 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.97□□□□□ -1.61
PROM1O43490 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.97□□□□□ -1.61
PROM1O43490 PPIAP17-201ENST00000438507 471 ntBASIC4.97□□□□□ -1.61
PROM1O43490 RPS24P1-201ENST00000438550 371 ntBASIC4.97□□□□□ -1.61
PROM1O43490 AL450263.2-201ENST00000439400 589 ntBASIC4.97□□□□□ -1.61
PROM1O43490 MTND6P18-201ENST00000439477 513 ntBASIC4.97□□□□□ -1.61
PROM1O43490 BMI1P1-201ENST00000445879 941 ntBASIC4.97□□□□□ -1.61
PROM1O43490 AC104306.1-201ENST00000449702 371 ntBASIC4.97□□□□□ -1.61
PROM1O43490 RPL36AP33-201ENST00000450395 310 ntBASIC4.97□□□□□ -1.61
PROM1O43490 BX248409.1-201ENST00000455497 255 ntBASIC4.97□□□□□ -1.61
PROM1O43490 AC005912.1-201ENST00000495392 255 ntBASIC4.97□□□□□ -1.61
PROM1O43490 RN7SL808P-201ENST00000496066 299 ntBASIC4.97□□□□□ -1.61
PROM1O43490 AC004069.2-201ENST00000505438 1114 ntBASIC4.97□□□□□ -1.61
PROM1O43490 RPS4XP20-201ENST00000505751 772 ntBASIC4.97□□□□□ -1.61
PROM1O43490 CBX3P3-201ENST00000508108 532 ntBASIC4.97□□□□□ -1.61
PROM1O43490 AC006427.1-201ENST00000514359 712 ntBASIC4.97□□□□□ -1.61
PROM1O43490 RNU6-1225P-201ENST00000516336 65 ntBASIC4.97□□□□□ -1.61
PROM1O43490 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.97□□□□□ -1.61
PROM1O43490 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
PROM1O43490 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.97□□□□□ -1.61
PROM1O43490 HIGD1AP5-201ENST00000529959 259 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms