Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RPH3AQ9Y2J0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.73■□□□□ 0.43
RPH3AQ9Y2J0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.73■□□□□ 0.43
RPH3AQ9Y2J0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPH3AQ9Y2J0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPH3AQ9Y2J0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPH3AQ9Y2J0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RPH3AQ9Y2J0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RPH3AQ9Y2J0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.73■□□□□ 0.43
RPH3AQ9Y2J0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.73■□□□□ 0.43
RPH3AQ9Y2J0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RPH3AQ9Y2J0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RPH3AQ9Y2J0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPH3AQ9Y2J0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPH3AQ9Y2J0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.72■□□□□ 0.43
RPH3AQ9Y2J0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RPH3AQ9Y2J0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RPH3AQ9Y2J0 AL135905.2-201ENST00000584934 1404 ntBASIC17.72■□□□□ 0.43
RPH3AQ9Y2J0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPH3AQ9Y2J0 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
RPH3AQ9Y2J0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPH3AQ9Y2J0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RPH3AQ9Y2J0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RPH3AQ9Y2J0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RPH3AQ9Y2J0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPH3AQ9Y2J0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.72■□□□□ 0.43
RPH3AQ9Y2J0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPH3AQ9Y2J0 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPH3AQ9Y2J0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.72■□□□□ 0.43
RPH3AQ9Y2J0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.72■□□□□ 0.43
RPH3AQ9Y2J0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPH3AQ9Y2J0 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.72■□□□□ 0.43
RPH3AQ9Y2J0 AP002982.1-201ENST00000492365 877 ntBASIC17.72■□□□□ 0.43
RPH3AQ9Y2J0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.72■□□□□ 0.43
RPH3AQ9Y2J0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.72■□□□□ 0.43
RPH3AQ9Y2J0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.72■□□□□ 0.43
RPH3AQ9Y2J0 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.72■□□□□ 0.43
RPH3AQ9Y2J0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPH3AQ9Y2J0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RPH3AQ9Y2J0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.72■□□□□ 0.43
RPH3AQ9Y2J0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RPH3AQ9Y2J0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.72■□□□□ 0.43
RPH3AQ9Y2J0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPH3AQ9Y2J0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.71■□□□□ 0.43
RPH3AQ9Y2J0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPH3AQ9Y2J0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPH3AQ9Y2J0 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
RPH3AQ9Y2J0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPH3AQ9Y2J0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.71■□□□□ 0.43
RPH3AQ9Y2J0 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.71■□□□□ 0.43
RPH3AQ9Y2J0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.71■□□□□ 0.43
RPH3AQ9Y2J0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPH3AQ9Y2J0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.71■□□□□ 0.43
RPH3AQ9Y2J0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPH3AQ9Y2J0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
RPH3AQ9Y2J0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.71■□□□□ 0.43
RPH3AQ9Y2J0 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
RPH3AQ9Y2J0 SNORA78-201ENST00000459373 127 ntBASIC17.71■□□□□ 0.43
RPH3AQ9Y2J0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.71■□□□□ 0.43
RPH3AQ9Y2J0 AF186192.3-201ENST00000583427 947 ntBASIC17.71■□□□□ 0.43
RPH3AQ9Y2J0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.71■□□□□ 0.43
RPH3AQ9Y2J0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.71■□□□□ 0.43
RPH3AQ9Y2J0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPH3AQ9Y2J0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPH3AQ9Y2J0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPH3AQ9Y2J0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RPH3AQ9Y2J0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RPH3AQ9Y2J0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPH3AQ9Y2J0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RPH3AQ9Y2J0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.7■□□□□ 0.42
RPH3AQ9Y2J0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RPH3AQ9Y2J0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPH3AQ9Y2J0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPH3AQ9Y2J0 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPH3AQ9Y2J0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.7■□□□□ 0.42
RPH3AQ9Y2J0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.7■□□□□ 0.42
RPH3AQ9Y2J0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
RPH3AQ9Y2J0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPH3AQ9Y2J0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPH3AQ9Y2J0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
RPH3AQ9Y2J0 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPH3AQ9Y2J0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPH3AQ9Y2J0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.7■□□□□ 0.42
RPH3AQ9Y2J0 AC012618.2-201ENST00000428058 849 ntBASIC17.7■□□□□ 0.42
RPH3AQ9Y2J0 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPH3AQ9Y2J0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RPH3AQ9Y2J0 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPH3AQ9Y2J0 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPH3AQ9Y2J0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RPH3AQ9Y2J0 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.7■□□□□ 0.42
RPH3AQ9Y2J0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RPH3AQ9Y2J0 AC233702.5-201ENST00000584107 538 ntBASIC17.7■□□□□ 0.42
RPH3AQ9Y2J0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.7■□□□□ 0.42
RPH3AQ9Y2J0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPH3AQ9Y2J0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.7■□□□□ 0.42
RPH3AQ9Y2J0 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RPH3AQ9Y2J0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPH3AQ9Y2J0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.7■□□□□ 0.42
RPH3AQ9Y2J0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPH3AQ9Y2J0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms