Protein–RNA interactions for Protein: Q9UPR3

SMG5, Protein SMG5, humanhuman

Known RBP Predictions only

Length 1,016 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5Q9UPR3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMG5Q9UPR3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SMG5Q9UPR3 AL137013.1-201ENST00000432946 1228 ntBASIC20.3■□□□□ 0.84
SMG5Q9UPR3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.3■□□□□ 0.84
SMG5Q9UPR3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.3■□□□□ 0.84
SMG5Q9UPR3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.3■□□□□ 0.84
SMG5Q9UPR3 AP000525.1-201ENST00000608286 694 ntBASIC20.3■□□□□ 0.84
SMG5Q9UPR3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.3■□□□□ 0.84
SMG5Q9UPR3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.3■□□□□ 0.84
SMG5Q9UPR3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SMG5Q9UPR3 AC005332.7-201ENST00000614046 2005 ntBASIC20.3■□□□□ 0.84
SMG5Q9UPR3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMG5Q9UPR3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SMG5Q9UPR3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMG5Q9UPR3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMG5Q9UPR3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
SMG5Q9UPR3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.3■□□□□ 0.84
SMG5Q9UPR3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.29■□□□□ 0.84
SMG5Q9UPR3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.29■□□□□ 0.84
SMG5Q9UPR3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMG5Q9UPR3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMG5Q9UPR3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMG5Q9UPR3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMG5Q9UPR3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.29■□□□□ 0.84
SMG5Q9UPR3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SMG5Q9UPR3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMG5Q9UPR3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMG5Q9UPR3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.29■□□□□ 0.84
SMG5Q9UPR3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.29■□□□□ 0.84
SMG5Q9UPR3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMG5Q9UPR3 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.29■□□□□ 0.84
SMG5Q9UPR3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
SMG5Q9UPR3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMG5Q9UPR3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMG5Q9UPR3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMG5Q9UPR3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMG5Q9UPR3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMG5Q9UPR3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SMG5Q9UPR3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMG5Q9UPR3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMG5Q9UPR3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.28■□□□□ 0.84
SMG5Q9UPR3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.28■□□□□ 0.84
SMG5Q9UPR3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
SMG5Q9UPR3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMG5Q9UPR3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMG5Q9UPR3 UNC93B2-201ENST00000285383 730 ntBASIC20.28■□□□□ 0.84
SMG5Q9UPR3 DUX4L26-201ENST00000489078 1255 ntBASIC20.28■□□□□ 0.84
SMG5Q9UPR3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.28■□□□□ 0.84
SMG5Q9UPR3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.28■□□□□ 0.84
SMG5Q9UPR3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.28■□□□□ 0.84
SMG5Q9UPR3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SMG5Q9UPR3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.28■□□□□ 0.84
SMG5Q9UPR3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.28■□□□□ 0.84
SMG5Q9UPR3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMG5Q9UPR3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMG5Q9UPR3 AC079598.2-202ENST00000546624 1451 ntBASIC20.28■□□□□ 0.84
SMG5Q9UPR3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.28■□□□□ 0.84
SMG5Q9UPR3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SMG5Q9UPR3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMG5Q9UPR3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
SMG5Q9UPR3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.28■□□□□ 0.84
SMG5Q9UPR3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMG5Q9UPR3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.27■□□□□ 0.84
SMG5Q9UPR3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMG5Q9UPR3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.27■□□□□ 0.84
SMG5Q9UPR3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMG5Q9UPR3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMG5Q9UPR3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMG5Q9UPR3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SMG5Q9UPR3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMG5Q9UPR3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMG5Q9UPR3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMG5Q9UPR3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.27■□□□□ 0.84
SMG5Q9UPR3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMG5Q9UPR3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SMG5Q9UPR3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.27■□□□□ 0.84
SMG5Q9UPR3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMG5Q9UPR3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMG5Q9UPR3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMG5Q9UPR3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMG5Q9UPR3 MIR1238-201ENST00000408483 83 ntBASIC20.27■□□□□ 0.84
SMG5Q9UPR3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMG5Q9UPR3 KRT16P5-201ENST00000455284 522 ntBASIC20.27■□□□□ 0.84
SMG5Q9UPR3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.27■□□□□ 0.84
SMG5Q9UPR3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
SMG5Q9UPR3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMG5Q9UPR3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.27■□□□□ 0.84
SMG5Q9UPR3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.27■□□□□ 0.84
SMG5Q9UPR3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.27■□□□□ 0.84
SMG5Q9UPR3 AL031963.3-201ENST00000606441 850 ntBASIC20.27■□□□□ 0.84
SMG5Q9UPR3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMG5Q9UPR3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SMG5Q9UPR3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMG5Q9UPR3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMG5Q9UPR3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.27■□□□□ 0.84
SMG5Q9UPR3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMG5Q9UPR3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
SMG5Q9UPR3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SMG5Q9UPR3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
SMG5Q9UPR3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms