Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.81■□□□□ 0.92
CXXC1Q9P0U4 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.81■□□□□ 0.92
CXXC1Q9P0U4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CXXC1Q9P0U4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CXXC1Q9P0U4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.81■□□□□ 0.92
CXXC1Q9P0U4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CXXC1Q9P0U4 BX119927.1-201ENST00000636596 1552 ntBASIC20.8■□□□□ 0.92
CXXC1Q9P0U4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CXXC1Q9P0U4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
CXXC1Q9P0U4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CXXC1Q9P0U4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CXXC1Q9P0U4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.8■□□□□ 0.92
CXXC1Q9P0U4 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.8■□□□□ 0.92
CXXC1Q9P0U4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CXXC1Q9P0U4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CXXC1Q9P0U4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.8■□□□□ 0.92
CXXC1Q9P0U4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.8■□□□□ 0.92
CXXC1Q9P0U4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CXXC1Q9P0U4 IFNL4P1-201ENST00000607083 540 ntBASIC20.8■□□□□ 0.92
CXXC1Q9P0U4 AL121672.3-201ENST00000608644 468 ntBASIC20.8■□□□□ 0.92
CXXC1Q9P0U4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
CXXC1Q9P0U4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.8■□□□□ 0.92
CXXC1Q9P0U4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CXXC1Q9P0U4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CXXC1Q9P0U4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.8■□□□□ 0.92
CXXC1Q9P0U4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CXXC1Q9P0U4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CXXC1Q9P0U4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CXXC1Q9P0U4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CXXC1Q9P0U4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CXXC1Q9P0U4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.79■□□□□ 0.92
CXXC1Q9P0U4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CXXC1Q9P0U4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CXXC1Q9P0U4 BX276092.5-203ENST00000456199 560 ntBASIC20.79■□□□□ 0.92
CXXC1Q9P0U4 EMBP1-201ENST00000458200 901 ntBASIC20.79■□□□□ 0.92
CXXC1Q9P0U4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.79■□□□□ 0.92
CXXC1Q9P0U4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.79■□□□□ 0.92
CXXC1Q9P0U4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.79■□□□□ 0.92
CXXC1Q9P0U4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CXXC1Q9P0U4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.79■□□□□ 0.92
CXXC1Q9P0U4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.79■□□□□ 0.92
CXXC1Q9P0U4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.79■□□□□ 0.92
CXXC1Q9P0U4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CXXC1Q9P0U4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
CXXC1Q9P0U4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CXXC1Q9P0U4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.78■□□□□ 0.92
CXXC1Q9P0U4 EP400NL-214ENST00000641289 2402 ntBASIC20.78■□□□□ 0.92
CXXC1Q9P0U4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.78■□□□□ 0.92
CXXC1Q9P0U4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CXXC1Q9P0U4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.78■□□□□ 0.92
CXXC1Q9P0U4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.78■□□□□ 0.92
CXXC1Q9P0U4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CXXC1Q9P0U4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.78■□□□□ 0.92
CXXC1Q9P0U4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.78■□□□□ 0.92
CXXC1Q9P0U4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.78■□□□□ 0.92
CXXC1Q9P0U4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
CXXC1Q9P0U4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.78■□□□□ 0.92
CXXC1Q9P0U4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.78■□□□□ 0.92
CXXC1Q9P0U4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.78■□□□□ 0.92
CXXC1Q9P0U4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.78■□□□□ 0.92
CXXC1Q9P0U4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CXXC1Q9P0U4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CXXC1Q9P0U4 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.78■□□□□ 0.92
CXXC1Q9P0U4 AL031008.1-201ENST00000619963 541 ntBASIC20.78■□□□□ 0.92
CXXC1Q9P0U4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CXXC1Q9P0U4 FEM1AP1-201ENST00000431297 1995 ntBASIC20.77■□□□□ 0.92
CXXC1Q9P0U4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.77■□□□□ 0.92
CXXC1Q9P0U4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CXXC1Q9P0U4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CXXC1Q9P0U4 AL022342.1-201ENST00000400363 863 ntBASIC20.77■□□□□ 0.92
CXXC1Q9P0U4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.77■□□□□ 0.92
CXXC1Q9P0U4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.77■□□□□ 0.92
CXXC1Q9P0U4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CXXC1Q9P0U4 AP002414.4-201ENST00000589764 1148 ntBASIC20.77■□□□□ 0.92
CXXC1Q9P0U4 AC104692.2-201ENST00000603054 253 ntBASIC20.77■□□□□ 0.92
CXXC1Q9P0U4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CXXC1Q9P0U4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CXXC1Q9P0U4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.77■□□□□ 0.91
CXXC1Q9P0U4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXXC1Q9P0U4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXXC1Q9P0U4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CXXC1Q9P0U4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CXXC1Q9P0U4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CXXC1Q9P0U4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXXC1Q9P0U4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CXXC1Q9P0U4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CXXC1Q9P0U4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.76■□□□□ 0.91
CXXC1Q9P0U4 NUS1P1-201ENST00000446295 882 ntBASIC20.76■□□□□ 0.91
CXXC1Q9P0U4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.76■□□□□ 0.91
CXXC1Q9P0U4 AL732292.2-201ENST00000609649 430 ntBASIC20.76■□□□□ 0.91
CXXC1Q9P0U4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CXXC1Q9P0U4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CXXC1Q9P0U4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.76■□□□□ 0.91
CXXC1Q9P0U4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXXC1Q9P0U4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CXXC1Q9P0U4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXXC1Q9P0U4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CXXC1Q9P0U4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CXXC1Q9P0U4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CXXC1Q9P0U4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms