Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBP1Q9NZI7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBP1Q9NZI7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBP1Q9NZI7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
UBP1Q9NZI7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
UBP1Q9NZI7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBP1Q9NZI7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBP1Q9NZI7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.69■□□□□ 0.74
UBP1Q9NZI7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.69■□□□□ 0.74
UBP1Q9NZI7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBP1Q9NZI7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBP1Q9NZI7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.69■□□□□ 0.74
UBP1Q9NZI7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.69■□□□□ 0.74
UBP1Q9NZI7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.69■□□□□ 0.74
UBP1Q9NZI7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
UBP1Q9NZI7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBP1Q9NZI7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.69■□□□□ 0.74
UBP1Q9NZI7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
UBP1Q9NZI7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
UBP1Q9NZI7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBP1Q9NZI7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
UBP1Q9NZI7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
UBP1Q9NZI7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBP1Q9NZI7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.69■□□□□ 0.74
UBP1Q9NZI7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBP1Q9NZI7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBP1Q9NZI7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBP1Q9NZI7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.69■□□□□ 0.74
UBP1Q9NZI7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBP1Q9NZI7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBP1Q9NZI7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.68■□□□□ 0.74
UBP1Q9NZI7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.68■□□□□ 0.74
UBP1Q9NZI7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBP1Q9NZI7 SDHAP1-207ENST00000440850 2000 ntBASIC19.68■□□□□ 0.74
UBP1Q9NZI7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBP1Q9NZI7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBP1Q9NZI7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBP1Q9NZI7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBP1Q9NZI7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
UBP1Q9NZI7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.68■□□□□ 0.74
UBP1Q9NZI7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.68■□□□□ 0.74
UBP1Q9NZI7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.68■□□□□ 0.74
UBP1Q9NZI7 C1QBPP2-201ENST00000528754 825 ntBASIC19.68■□□□□ 0.74
UBP1Q9NZI7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
UBP1Q9NZI7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
UBP1Q9NZI7 AC124016.1-201ENST00000609552 612 ntBASIC19.68■□□□□ 0.74
UBP1Q9NZI7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.68■□□□□ 0.74
UBP1Q9NZI7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.68■□□□□ 0.74
UBP1Q9NZI7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
UBP1Q9NZI7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBP1Q9NZI7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.68■□□□□ 0.74
UBP1Q9NZI7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBP1Q9NZI7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBP1Q9NZI7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBP1Q9NZI7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBP1Q9NZI7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBP1Q9NZI7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBP1Q9NZI7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
UBP1Q9NZI7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBP1Q9NZI7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
UBP1Q9NZI7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBP1Q9NZI7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBP1Q9NZI7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
UBP1Q9NZI7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBP1Q9NZI7 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.67■□□□□ 0.74
UBP1Q9NZI7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBP1Q9NZI7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBP1Q9NZI7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
UBP1Q9NZI7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBP1Q9NZI7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
UBP1Q9NZI7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBP1Q9NZI7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.67■□□□□ 0.74
UBP1Q9NZI7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.67■□□□□ 0.74
UBP1Q9NZI7 AC004264.1-201ENST00000608354 794 ntBASIC19.67■□□□□ 0.74
UBP1Q9NZI7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.67■□□□□ 0.74
UBP1Q9NZI7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.67■□□□□ 0.74
UBP1Q9NZI7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBP1Q9NZI7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
UBP1Q9NZI7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBP1Q9NZI7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.67■□□□□ 0.74
UBP1Q9NZI7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBP1Q9NZI7 AC104417.2-201ENST00000562989 1793 ntBASIC19.67■□□□□ 0.74
UBP1Q9NZI7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBP1Q9NZI7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.67■□□□□ 0.74
UBP1Q9NZI7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBP1Q9NZI7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBP1Q9NZI7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBP1Q9NZI7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBP1Q9NZI7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
UBP1Q9NZI7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBP1Q9NZI7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
UBP1Q9NZI7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.66■□□□□ 0.74
UBP1Q9NZI7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBP1Q9NZI7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.66■□□□□ 0.74
UBP1Q9NZI7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.66■□□□□ 0.74
UBP1Q9NZI7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.66■□□□□ 0.74
UBP1Q9NZI7 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.66■□□□□ 0.74
UBP1Q9NZI7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.66■□□□□ 0.74
UBP1Q9NZI7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.66■□□□□ 0.74
UBP1Q9NZI7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms