Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 MIR6786-201ENST00000616843 113 ntBASIC18.66■□□□□ 0.58
SPHK1Q9NYA1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPHK1Q9NYA1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SPHK1Q9NYA1 RCC2P6-201ENST00000526625 1557 ntBASIC18.66■□□□□ 0.58
SPHK1Q9NYA1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SPHK1Q9NYA1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPHK1Q9NYA1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPHK1Q9NYA1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPHK1Q9NYA1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SPHK1Q9NYA1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SPHK1Q9NYA1 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPHK1Q9NYA1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.65■□□□□ 0.58
SPHK1Q9NYA1 RBM17P1-201ENST00000453646 1190 ntBASIC18.65■□□□□ 0.58
SPHK1Q9NYA1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SPHK1Q9NYA1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.65■□□□□ 0.58
SPHK1Q9NYA1 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.65■□□□□ 0.58
SPHK1Q9NYA1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.65■□□□□ 0.58
SPHK1Q9NYA1 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.65■□□□□ 0.58
SPHK1Q9NYA1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SPHK1Q9NYA1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SPHK1Q9NYA1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SPHK1Q9NYA1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SPHK1Q9NYA1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SPHK1Q9NYA1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPHK1Q9NYA1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SPHK1Q9NYA1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
SPHK1Q9NYA1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.65■□□□□ 0.58
SPHK1Q9NYA1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPHK1Q9NYA1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SPHK1Q9NYA1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPHK1Q9NYA1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SPHK1Q9NYA1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.65■□□□□ 0.58
SPHK1Q9NYA1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
SPHK1Q9NYA1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SPHK1Q9NYA1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SPHK1Q9NYA1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.64■□□□□ 0.57
SPHK1Q9NYA1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPHK1Q9NYA1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SPHK1Q9NYA1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SPHK1Q9NYA1 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.64■□□□□ 0.57
SPHK1Q9NYA1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SPHK1Q9NYA1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.64■□□□□ 0.57
SPHK1Q9NYA1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.64■□□□□ 0.57
SPHK1Q9NYA1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.64■□□□□ 0.57
SPHK1Q9NYA1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SPHK1Q9NYA1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.64■□□□□ 0.57
SPHK1Q9NYA1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPHK1Q9NYA1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.64■□□□□ 0.57
SPHK1Q9NYA1 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPHK1Q9NYA1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.64■□□□□ 0.57
SPHK1Q9NYA1 AC079598.2-202ENST00000546624 1451 ntBASIC18.64■□□□□ 0.57
SPHK1Q9NYA1 FSCN1P1-201ENST00000568912 1481 ntBASIC18.64■□□□□ 0.57
SPHK1Q9NYA1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPHK1Q9NYA1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPHK1Q9NYA1 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
SPHK1Q9NYA1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
SPHK1Q9NYA1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SPHK1Q9NYA1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPHK1Q9NYA1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SPHK1Q9NYA1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPHK1Q9NYA1 SDHAP1-207ENST00000440850 2000 ntBASIC18.63■□□□□ 0.57
SPHK1Q9NYA1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
SPHK1Q9NYA1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SPHK1Q9NYA1 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.63■□□□□ 0.57
SPHK1Q9NYA1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.63■□□□□ 0.57
SPHK1Q9NYA1 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SPHK1Q9NYA1 BX088651.1-201ENST00000540551 451 ntBASIC18.63■□□□□ 0.57
SPHK1Q9NYA1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SPHK1Q9NYA1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.63■□□□□ 0.57
SPHK1Q9NYA1 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.63■□□□□ 0.57
SPHK1Q9NYA1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.63■□□□□ 0.57
SPHK1Q9NYA1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.63■□□□□ 0.57
SPHK1Q9NYA1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPHK1Q9NYA1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.63■□□□□ 0.57
SPHK1Q9NYA1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SPHK1Q9NYA1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SPHK1Q9NYA1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPHK1Q9NYA1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SPHK1Q9NYA1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPHK1Q9NYA1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SPHK1Q9NYA1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SPHK1Q9NYA1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPHK1Q9NYA1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPHK1Q9NYA1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.63■□□□□ 0.57
SPHK1Q9NYA1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPHK1Q9NYA1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.62■□□□□ 0.57
SPHK1Q9NYA1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.62■□□□□ 0.57
SPHK1Q9NYA1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SPHK1Q9NYA1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPHK1Q9NYA1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPHK1Q9NYA1 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPHK1Q9NYA1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SPHK1Q9NYA1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.62■□□□□ 0.57
SPHK1Q9NYA1 AC004951.3-201ENST00000418645 1148 ntBASIC18.62■□□□□ 0.57
SPHK1Q9NYA1 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.62■□□□□ 0.57
SPHK1Q9NYA1 AC091390.4-202ENST00000476426 537 ntBASIC18.62■□□□□ 0.57
SPHK1Q9NYA1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.62■□□□□ 0.57
SPHK1Q9NYA1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SPHK1Q9NYA1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.62■□□□□ 0.57
SPHK1Q9NYA1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms