Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.54■■□□□ 1.04
BLOC1S4Q9NUP1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.54■■□□□ 1.04
BLOC1S4Q9NUP1 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.54■■□□□ 1.04
BLOC1S4Q9NUP1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
BLOC1S4Q9NUP1 AL160286.2-201ENST00000567150 934 ntBASIC21.54■■□□□ 1.04
BLOC1S4Q9NUP1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.54■■□□□ 1.04
BLOC1S4Q9NUP1 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BLOC1S4Q9NUP1 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BLOC1S4Q9NUP1 FAM197Y4-202ENST00000622692 608 ntBASIC21.54■■□□□ 1.04
BLOC1S4Q9NUP1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BLOC1S4Q9NUP1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BLOC1S4Q9NUP1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BLOC1S4Q9NUP1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BLOC1S4Q9NUP1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.54■■□□□ 1.04
BLOC1S4Q9NUP1 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
BLOC1S4Q9NUP1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.54■■□□□ 1.04
BLOC1S4Q9NUP1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
BLOC1S4Q9NUP1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.53■■□□□ 1.04
BLOC1S4Q9NUP1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
BLOC1S4Q9NUP1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
BLOC1S4Q9NUP1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
BLOC1S4Q9NUP1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
BLOC1S4Q9NUP1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
BLOC1S4Q9NUP1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.53■■□□□ 1.04
BLOC1S4Q9NUP1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
BLOC1S4Q9NUP1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BLOC1S4Q9NUP1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BLOC1S4Q9NUP1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BLOC1S4Q9NUP1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BLOC1S4Q9NUP1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BLOC1S4Q9NUP1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.53■■□□□ 1.04
BLOC1S4Q9NUP1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
BLOC1S4Q9NUP1 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
BLOC1S4Q9NUP1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.53■■□□□ 1.04
BLOC1S4Q9NUP1 RARRES2P10-201ENST00000564312 460 ntBASIC21.53■■□□□ 1.04
BLOC1S4Q9NUP1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
BLOC1S4Q9NUP1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.53■■□□□ 1.04
BLOC1S4Q9NUP1 AL445675.2-201ENST00000620291 557 ntBASIC21.53■■□□□ 1.04
BLOC1S4Q9NUP1 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BLOC1S4Q9NUP1 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
BLOC1S4Q9NUP1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BLOC1S4Q9NUP1 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
BLOC1S4Q9NUP1 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BLOC1S4Q9NUP1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
BLOC1S4Q9NUP1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
BLOC1S4Q9NUP1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
BLOC1S4Q9NUP1 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
BLOC1S4Q9NUP1 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
BLOC1S4Q9NUP1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
BLOC1S4Q9NUP1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
BLOC1S4Q9NUP1 AL158047.1-201ENST00000445918 881 ntBASIC21.52■■□□□ 1.04
BLOC1S4Q9NUP1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.52■■□□□ 1.04
BLOC1S4Q9NUP1 Z85996.1-201ENST00000494644 937 ntBASIC21.52■■□□□ 1.04
BLOC1S4Q9NUP1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.52■■□□□ 1.04
BLOC1S4Q9NUP1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
BLOC1S4Q9NUP1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
BLOC1S4Q9NUP1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
BLOC1S4Q9NUP1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
BLOC1S4Q9NUP1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
BLOC1S4Q9NUP1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.52■■□□□ 1.03
BLOC1S4Q9NUP1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
BLOC1S4Q9NUP1 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
BLOC1S4Q9NUP1 KRT8P41-201ENST00000533985 1514 ntBASIC21.51■■□□□ 1.03
BLOC1S4Q9NUP1 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
BLOC1S4Q9NUP1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
BLOC1S4Q9NUP1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
BLOC1S4Q9NUP1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
BLOC1S4Q9NUP1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
BLOC1S4Q9NUP1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.51■■□□□ 1.03
BLOC1S4Q9NUP1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
BLOC1S4Q9NUP1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.51■■□□□ 1.03
BLOC1S4Q9NUP1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.51■■□□□ 1.03
BLOC1S4Q9NUP1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.51■■□□□ 1.03
BLOC1S4Q9NUP1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
BLOC1S4Q9NUP1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
BLOC1S4Q9NUP1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
BLOC1S4Q9NUP1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
BLOC1S4Q9NUP1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.5■■□□□ 1.03
BLOC1S4Q9NUP1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.5■■□□□ 1.03
BLOC1S4Q9NUP1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
BLOC1S4Q9NUP1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
BLOC1S4Q9NUP1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
BLOC1S4Q9NUP1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
BLOC1S4Q9NUP1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
BLOC1S4Q9NUP1 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.5■■□□□ 1.03
BLOC1S4Q9NUP1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
BLOC1S4Q9NUP1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
BLOC1S4Q9NUP1 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
BLOC1S4Q9NUP1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
BLOC1S4Q9NUP1 AC004980.1-204ENST00000429707 299 ntBASIC21.5■■□□□ 1.03
BLOC1S4Q9NUP1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.5■■□□□ 1.03
BLOC1S4Q9NUP1 AF186192.3-201ENST00000583427 947 ntBASIC21.5■■□□□ 1.03
BLOC1S4Q9NUP1 TMEM191A-211ENST00000637163 1067 ntBASIC21.5■■□□□ 1.03
BLOC1S4Q9NUP1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
BLOC1S4Q9NUP1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.5■■□□□ 1.03
BLOC1S4Q9NUP1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
BLOC1S4Q9NUP1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
BLOC1S4Q9NUP1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
BLOC1S4Q9NUP1 AL161938.1-201ENST00000569833 2180 ntBASIC21.5■■□□□ 1.03
BLOC1S4Q9NUP1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms