Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.39■□□□□ 0.53
CCM2LQ9NUG4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCM2LQ9NUG4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCM2LQ9NUG4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCM2LQ9NUG4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCM2LQ9NUG4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CCM2LQ9NUG4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCM2LQ9NUG4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCM2LQ9NUG4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCM2LQ9NUG4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCM2LQ9NUG4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.38■□□□□ 0.53
CCM2LQ9NUG4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCM2LQ9NUG4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCM2LQ9NUG4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCM2LQ9NUG4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.38■□□□□ 0.53
CCM2LQ9NUG4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.38■□□□□ 0.53
CCM2LQ9NUG4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCM2LQ9NUG4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCM2LQ9NUG4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCM2LQ9NUG4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCM2LQ9NUG4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCM2LQ9NUG4 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.37■□□□□ 0.53
CCM2LQ9NUG4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CCM2LQ9NUG4 KRT8P20-201ENST00000423953 1409 ntBASIC18.37■□□□□ 0.53
CCM2LQ9NUG4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.37■□□□□ 0.53
CCM2LQ9NUG4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.37■□□□□ 0.53
CCM2LQ9NUG4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CCM2LQ9NUG4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCM2LQ9NUG4 AL031598.1-201ENST00000561511 1773 ntBASIC18.37■□□□□ 0.53
CCM2LQ9NUG4 AC141586.3-201ENST00000562166 1838 ntBASIC18.37■□□□□ 0.53
CCM2LQ9NUG4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCM2LQ9NUG4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.37■□□□□ 0.53
CCM2LQ9NUG4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCM2LQ9NUG4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCM2LQ9NUG4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.37■□□□□ 0.53
CCM2LQ9NUG4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCM2LQ9NUG4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCM2LQ9NUG4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCM2LQ9NUG4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCM2LQ9NUG4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCM2LQ9NUG4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCM2LQ9NUG4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.36■□□□□ 0.53
CCM2LQ9NUG4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.36■□□□□ 0.53
CCM2LQ9NUG4 WIZP1-201ENST00000531444 2299 ntBASIC18.36■□□□□ 0.53
CCM2LQ9NUG4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.36■□□□□ 0.53
CCM2LQ9NUG4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCM2LQ9NUG4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CCM2LQ9NUG4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.36■□□□□ 0.53
CCM2LQ9NUG4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCM2LQ9NUG4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 AC018470.1-201ENST00000624790 3129 ntBASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 CYP21A1P-202ENST00000354927 1481 ntBASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 DUSP5P2-201ENST00000426873 1033 ntBASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 AC010536.3-201ENST00000620306 533 ntBASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 BICD1-207ENST00000551848 1962 ntBASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCM2LQ9NUG4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCM2LQ9NUG4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCM2LQ9NUG4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCM2LQ9NUG4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCM2LQ9NUG4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.34■□□□□ 0.53
CCM2LQ9NUG4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCM2LQ9NUG4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.34■□□□□ 0.53
CCM2LQ9NUG4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCM2LQ9NUG4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCM2LQ9NUG4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCM2LQ9NUG4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
CCM2LQ9NUG4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCM2LQ9NUG4 MIPEPP3-201ENST00000412105 444 ntBASIC18.34■□□□□ 0.53
CCM2LQ9NUG4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms