Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AL023875.1-201ENST00000640777 796 ntBASIC19.31■□□□□ 0.68
TREX1Q9NSU2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TREX1Q9NSU2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TREX1Q9NSU2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.31■□□□□ 0.68
TREX1Q9NSU2 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TREX1Q9NSU2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TREX1Q9NSU2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TREX1Q9NSU2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TREX1Q9NSU2 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.31■□□□□ 0.68
TREX1Q9NSU2 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TREX1Q9NSU2 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TREX1Q9NSU2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TREX1Q9NSU2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TREX1Q9NSU2 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TREX1Q9NSU2 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TREX1Q9NSU2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TREX1Q9NSU2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
TREX1Q9NSU2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TREX1Q9NSU2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TREX1Q9NSU2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.3■□□□□ 0.68
TREX1Q9NSU2 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
TREX1Q9NSU2 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TREX1Q9NSU2 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.3■□□□□ 0.68
TREX1Q9NSU2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TREX1Q9NSU2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TREX1Q9NSU2 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TREX1Q9NSU2 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TREX1Q9NSU2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.3■□□□□ 0.68
TREX1Q9NSU2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.3■□□□□ 0.68
TREX1Q9NSU2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TREX1Q9NSU2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.3■□□□□ 0.68
TREX1Q9NSU2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.3■□□□□ 0.68
TREX1Q9NSU2 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TREX1Q9NSU2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TREX1Q9NSU2 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TREX1Q9NSU2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TREX1Q9NSU2 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TREX1Q9NSU2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TREX1Q9NSU2 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.29■□□□□ 0.68
TREX1Q9NSU2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TREX1Q9NSU2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TREX1Q9NSU2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TREX1Q9NSU2 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TREX1Q9NSU2 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TREX1Q9NSU2 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TREX1Q9NSU2 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TREX1Q9NSU2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.29■□□□□ 0.68
TREX1Q9NSU2 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TREX1Q9NSU2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TREX1Q9NSU2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.29■□□□□ 0.68
TREX1Q9NSU2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
TREX1Q9NSU2 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.29■□□□□ 0.68
TREX1Q9NSU2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TREX1Q9NSU2 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TREX1Q9NSU2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TREX1Q9NSU2 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TREX1Q9NSU2 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.29■□□□□ 0.68
TREX1Q9NSU2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TREX1Q9NSU2 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TREX1Q9NSU2 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 KRASP1-201ENST00000407852 552 ntBASIC19.28■□□□□ 0.68
TREX1Q9NSU2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 AC239809.2-201ENST00000415381 517 ntBASIC19.28■□□□□ 0.68
TREX1Q9NSU2 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 AC133681.1-201ENST00000465482 601 ntBASIC19.28■□□□□ 0.68
TREX1Q9NSU2 RN7SL471P-201ENST00000580476 299 ntBASIC19.28■□□□□ 0.68
TREX1Q9NSU2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 MIR4651-201ENST00000582622 73 ntBASIC19.28■□□□□ 0.68
TREX1Q9NSU2 AC124016.1-201ENST00000609552 612 ntBASIC19.28■□□□□ 0.68
TREX1Q9NSU2 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 AC073648.6-201ENST00000641589 218 ntBASIC19.28■□□□□ 0.68
TREX1Q9NSU2 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TREX1Q9NSU2 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms