Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC9.96□□□□□ -0.81
CDC42SE1Q9NRR8 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CDC42SE1Q9NRR8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CDC42SE1Q9NRR8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CDC42SE1Q9NRR8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC9.96□□□□□ -0.81
CDC42SE1Q9NRR8 PCDHB17P-201ENST00000539533 2393 ntBASIC9.96□□□□□ -0.81
CDC42SE1Q9NRR8 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC9.96□□□□□ -0.81
CDC42SE1Q9NRR8 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CDC42SE1Q9NRR8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CDC42SE1Q9NRR8 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CDC42SE1Q9NRR8 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC9.96□□□□□ -0.81
CDC42SE1Q9NRR8 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
CDC42SE1Q9NRR8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CDC42SE1Q9NRR8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
CDC42SE1Q9NRR8 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
CDC42SE1Q9NRR8 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CDC42SE1Q9NRR8 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
CDC42SE1Q9NRR8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CDC42SE1Q9NRR8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC9.96□□□□□ -0.81
CDC42SE1Q9NRR8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
CDC42SE1Q9NRR8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
CDC42SE1Q9NRR8 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC9.96□□□□□ -0.81
CDC42SE1Q9NRR8 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
CDC42SE1Q9NRR8 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC9.96□□□□□ -0.81
CDC42SE1Q9NRR8 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
CDC42SE1Q9NRR8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC9.96□□□□□ -0.81
CDC42SE1Q9NRR8 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CDC42SE1Q9NRR8 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC9.96□□□□□ -0.81
CDC42SE1Q9NRR8 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC9.96□□□□□ -0.81
CDC42SE1Q9NRR8 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC9.96□□□□□ -0.81
CDC42SE1Q9NRR8 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC9.96□□□□□ -0.81
CDC42SE1Q9NRR8 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CDC42SE1Q9NRR8 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
CDC42SE1Q9NRR8 INO80B-203ENST00000409917 796 ntTSL 2 BASIC9.96□□□□□ -0.82
CDC42SE1Q9NRR8 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
CDC42SE1Q9NRR8 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
CDC42SE1Q9NRR8 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
CDC42SE1Q9NRR8 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
CDC42SE1Q9NRR8 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
CDC42SE1Q9NRR8 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
CDC42SE1Q9NRR8 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
CDC42SE1Q9NRR8 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
CDC42SE1Q9NRR8 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
CDC42SE1Q9NRR8 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
CDC42SE1Q9NRR8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
CDC42SE1Q9NRR8 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
CDC42SE1Q9NRR8 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
CDC42SE1Q9NRR8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
CDC42SE1Q9NRR8 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
CDC42SE1Q9NRR8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
CDC42SE1Q9NRR8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 DOC2GP-204ENST00000639052 2548 ntBASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CDC42SE1Q9NRR8 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
CDC42SE1Q9NRR8 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms