Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC13.32□□□□□ -0.28
CDC42SE2Q9NRR3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CDC42SE2Q9NRR3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42SE2Q9NRR3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC13.32□□□□□ -0.28
CDC42SE2Q9NRR3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42SE2Q9NRR3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
CDC42SE2Q9NRR3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42SE2Q9NRR3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42SE2Q9NRR3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
CDC42SE2Q9NRR3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42SE2Q9NRR3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42SE2Q9NRR3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 AC005181.1-201ENST00000604782 1256 ntBASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42SE2Q9NRR3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 AC073210.2-201ENST00000430369 194 ntBASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 AC133552.2-202ENST00000575694 574 ntBASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42SE2Q9NRR3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42SE2Q9NRR3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42SE2Q9NRR3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42SE2Q9NRR3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42SE2Q9NRR3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42SE2Q9NRR3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42SE2Q9NRR3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42SE2Q9NRR3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42SE2Q9NRR3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC13.29□□□□□ -0.28
CDC42SE2Q9NRR3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42SE2Q9NRR3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC13.29□□□□□ -0.28
CDC42SE2Q9NRR3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42SE2Q9NRR3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC13.29□□□□□ -0.28
CDC42SE2Q9NRR3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC13.29□□□□□ -0.28
CDC42SE2Q9NRR3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42SE2Q9NRR3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42SE2Q9NRR3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
CDC42SE2Q9NRR3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms