Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
NECTIN3Q9NQS3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
NECTIN3Q9NQS3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
NECTIN3Q9NQS3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NECTIN3Q9NQS3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.52■□□□□ 0.56
NECTIN3Q9NQS3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.52■□□□□ 0.56
NECTIN3Q9NQS3 AC133681.1-201ENST00000465482 601 ntBASIC18.52■□□□□ 0.56
NECTIN3Q9NQS3 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.52■□□□□ 0.56
NECTIN3Q9NQS3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.52■□□□□ 0.56
NECTIN3Q9NQS3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.52■□□□□ 0.56
NECTIN3Q9NQS3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.52■□□□□ 0.56
NECTIN3Q9NQS3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.52■□□□□ 0.56
NECTIN3Q9NQS3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NECTIN3Q9NQS3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.52■□□□□ 0.56
NECTIN3Q9NQS3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NECTIN3Q9NQS3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NECTIN3Q9NQS3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
NECTIN3Q9NQS3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
NECTIN3Q9NQS3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
NECTIN3Q9NQS3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
NECTIN3Q9NQS3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NECTIN3Q9NQS3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.51■□□□□ 0.55
NECTIN3Q9NQS3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NECTIN3Q9NQS3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NECTIN3Q9NQS3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
NECTIN3Q9NQS3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.51■□□□□ 0.55
NECTIN3Q9NQS3 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.51■□□□□ 0.55
NECTIN3Q9NQS3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
NECTIN3Q9NQS3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NECTIN3Q9NQS3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.51■□□□□ 0.55
NECTIN3Q9NQS3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.51■□□□□ 0.55
NECTIN3Q9NQS3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.51■□□□□ 0.55
NECTIN3Q9NQS3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.51■□□□□ 0.55
NECTIN3Q9NQS3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.51■□□□□ 0.55
NECTIN3Q9NQS3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NECTIN3Q9NQS3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NECTIN3Q9NQS3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
NECTIN3Q9NQS3 NBPF21P-201ENST00000425093 1451 ntBASIC18.51■□□□□ 0.55
NECTIN3Q9NQS3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NECTIN3Q9NQS3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NECTIN3Q9NQS3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
NECTIN3Q9NQS3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NECTIN3Q9NQS3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NECTIN3Q9NQS3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.5■□□□□ 0.55
NECTIN3Q9NQS3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
NECTIN3Q9NQS3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NECTIN3Q9NQS3 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.5■□□□□ 0.55
NECTIN3Q9NQS3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NECTIN3Q9NQS3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NECTIN3Q9NQS3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.5■□□□□ 0.55
NECTIN3Q9NQS3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NECTIN3Q9NQS3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.5■□□□□ 0.55
NECTIN3Q9NQS3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.5■□□□□ 0.55
NECTIN3Q9NQS3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.5■□□□□ 0.55
NECTIN3Q9NQS3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.5■□□□□ 0.55
NECTIN3Q9NQS3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NECTIN3Q9NQS3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.5■□□□□ 0.55
NECTIN3Q9NQS3 AC110285.5-201ENST00000611501 352 ntBASIC18.5■□□□□ 0.55
NECTIN3Q9NQS3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NECTIN3Q9NQS3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NECTIN3Q9NQS3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
NECTIN3Q9NQS3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NECTIN3Q9NQS3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NECTIN3Q9NQS3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
NECTIN3Q9NQS3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NECTIN3Q9NQS3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.49■□□□□ 0.55
NECTIN3Q9NQS3 AC125437.2-201ENST00000625180 2167 ntBASIC18.49■□□□□ 0.55
NECTIN3Q9NQS3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
NECTIN3Q9NQS3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NECTIN3Q9NQS3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NECTIN3Q9NQS3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NECTIN3Q9NQS3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.49■□□□□ 0.55
NECTIN3Q9NQS3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.49■□□□□ 0.55
NECTIN3Q9NQS3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
NECTIN3Q9NQS3 AL158211.5-201ENST00000623583 2518 ntBASIC18.49■□□□□ 0.55
NECTIN3Q9NQS3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NECTIN3Q9NQS3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NECTIN3Q9NQS3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.49■□□□□ 0.55
NECTIN3Q9NQS3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.49■□□□□ 0.55
NECTIN3Q9NQS3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.49■□□□□ 0.55
NECTIN3Q9NQS3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.49■□□□□ 0.55
NECTIN3Q9NQS3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.49■□□□□ 0.55
NECTIN3Q9NQS3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.49■□□□□ 0.55
NECTIN3Q9NQS3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
NECTIN3Q9NQS3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
NECTIN3Q9NQS3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NECTIN3Q9NQS3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
NECTIN3Q9NQS3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
NECTIN3Q9NQS3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NECTIN3Q9NQS3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.49■□□□□ 0.55
NECTIN3Q9NQS3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.49■□□□□ 0.55
NECTIN3Q9NQS3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
NECTIN3Q9NQS3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NECTIN3Q9NQS3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.48■□□□□ 0.55
NECTIN3Q9NQS3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NECTIN3Q9NQS3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
NECTIN3Q9NQS3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NECTIN3Q9NQS3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NECTIN3Q9NQS3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
NECTIN3Q9NQS3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms