Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NEUROD4Q9HD90 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
NEUROD4Q9HD90 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NEUROD4Q9HD90 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NEUROD4Q9HD90 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
NEUROD4Q9HD90 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NEUROD4Q9HD90 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NEUROD4Q9HD90 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
NEUROD4Q9HD90 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 AC120498.9-201ENST00000339021 3867 ntBASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 AP006294.2-201ENST00000641667 209 ntBASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
NEUROD4Q9HD90 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NEUROD4Q9HD90 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NEUROD4Q9HD90 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NEUROD4Q9HD90 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.22■□□□□ 0.51
NEUROD4Q9HD90 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NEUROD4Q9HD90 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
NEUROD4Q9HD90 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.22■□□□□ 0.51
NEUROD4Q9HD90 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NEUROD4Q9HD90 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
NEUROD4Q9HD90 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.22■□□□□ 0.51
NEUROD4Q9HD90 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
NEUROD4Q9HD90 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NEUROD4Q9HD90 TUBB8P6-201ENST00000436895 1288 ntBASIC18.22■□□□□ 0.51
NEUROD4Q9HD90 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.22■□□□□ 0.51
NEUROD4Q9HD90 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
NEUROD4Q9HD90 UNC93B4-201ENST00000505679 747 ntBASIC18.22■□□□□ 0.51
NEUROD4Q9HD90 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.22■□□□□ 0.51
NEUROD4Q9HD90 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NEUROD4Q9HD90 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
NEUROD4Q9HD90 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NEUROD4Q9HD90 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NEUROD4Q9HD90 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.22■□□□□ 0.51
NEUROD4Q9HD90 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.22■□□□□ 0.51
NEUROD4Q9HD90 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.22■□□□□ 0.51
NEUROD4Q9HD90 TEX21P-204ENST00000641479 1693 ntBASIC18.22■□□□□ 0.51
NEUROD4Q9HD90 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NEUROD4Q9HD90 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NEUROD4Q9HD90 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 POM121L13P-201ENST00000422362 380 ntBASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 AC104417.2-201ENST00000562989 1793 ntBASIC18.21■□□□□ 0.51
NEUROD4Q9HD90 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms