Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
NXF3Q9H4D5 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
NXF3Q9H4D5 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
NXF3Q9H4D5 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.92■□□□□ 0.94
NXF3Q9H4D5 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.92■□□□□ 0.94
NXF3Q9H4D5 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NXF3Q9H4D5 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.92■□□□□ 0.94
NXF3Q9H4D5 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NXF3Q9H4D5 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
NXF3Q9H4D5 AC104417.2-201ENST00000562989 1793 ntBASIC20.92■□□□□ 0.94
NXF3Q9H4D5 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
NXF3Q9H4D5 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NXF3Q9H4D5 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.91■□□□□ 0.94
NXF3Q9H4D5 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
NXF3Q9H4D5 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NXF3Q9H4D5 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
NXF3Q9H4D5 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NXF3Q9H4D5 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NXF3Q9H4D5 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NXF3Q9H4D5 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.91■□□□□ 0.94
NXF3Q9H4D5 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.91■□□□□ 0.94
NXF3Q9H4D5 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.91■□□□□ 0.94
NXF3Q9H4D5 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NXF3Q9H4D5 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.91■□□□□ 0.94
NXF3Q9H4D5 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.91■□□□□ 0.94
NXF3Q9H4D5 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.91■□□□□ 0.94
NXF3Q9H4D5 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.91■□□□□ 0.94
NXF3Q9H4D5 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.91■□□□□ 0.94
NXF3Q9H4D5 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
NXF3Q9H4D5 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.9■□□□□ 0.94
NXF3Q9H4D5 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NXF3Q9H4D5 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NXF3Q9H4D5 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NXF3Q9H4D5 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.9■□□□□ 0.94
NXF3Q9H4D5 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
NXF3Q9H4D5 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NXF3Q9H4D5 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NXF3Q9H4D5 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NXF3Q9H4D5 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.9■□□□□ 0.94
NXF3Q9H4D5 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.9■□□□□ 0.94
NXF3Q9H4D5 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
NXF3Q9H4D5 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.9■□□□□ 0.94
NXF3Q9H4D5 AC128688.1-201ENST00000487626 519 ntBASIC20.9■□□□□ 0.94
NXF3Q9H4D5 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.9■□□□□ 0.94
NXF3Q9H4D5 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NXF3Q9H4D5 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.9■□□□□ 0.94
NXF3Q9H4D5 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
NXF3Q9H4D5 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NXF3Q9H4D5 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NXF3Q9H4D5 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.9■□□□□ 0.94
NXF3Q9H4D5 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NXF3Q9H4D5 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NXF3Q9H4D5 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NXF3Q9H4D5 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NXF3Q9H4D5 ZNF815P-204ENST00000434898 1737 ntBASIC20.9■□□□□ 0.94
NXF3Q9H4D5 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
NXF3Q9H4D5 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.89■□□□□ 0.94
NXF3Q9H4D5 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.89■□□□□ 0.94
NXF3Q9H4D5 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
NXF3Q9H4D5 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
NXF3Q9H4D5 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NXF3Q9H4D5 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.89■□□□□ 0.94
NXF3Q9H4D5 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
NXF3Q9H4D5 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.94
NXF3Q9H4D5 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NXF3Q9H4D5 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
NXF3Q9H4D5 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
NXF3Q9H4D5 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NXF3Q9H4D5 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NXF3Q9H4D5 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NXF3Q9H4D5 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NXF3Q9H4D5 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.89■□□□□ 0.93
NXF3Q9H4D5 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.89■□□□□ 0.93
NXF3Q9H4D5 CKBP1-201ENST00000565489 1086 ntBASIC20.89■□□□□ 0.93
NXF3Q9H4D5 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.89■□□□□ 0.93
NXF3Q9H4D5 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NXF3Q9H4D5 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
NXF3Q9H4D5 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NXF3Q9H4D5 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NXF3Q9H4D5 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NXF3Q9H4D5 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.89■□□□□ 0.93
NXF3Q9H4D5 KRT8P11-201ENST00000409686 1436 ntBASIC20.88■□□□□ 0.93
NXF3Q9H4D5 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
NXF3Q9H4D5 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NXF3Q9H4D5 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NXF3Q9H4D5 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NXF3Q9H4D5 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NXF3Q9H4D5 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.88■□□□□ 0.93
NXF3Q9H4D5 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NXF3Q9H4D5 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NXF3Q9H4D5 SLC25A1P2-201ENST00000430693 912 ntBASIC20.88■□□□□ 0.93
NXF3Q9H4D5 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.88■□□□□ 0.93
NXF3Q9H4D5 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NXF3Q9H4D5 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NXF3Q9H4D5 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.88■□□□□ 0.93
NXF3Q9H4D5 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.88■□□□□ 0.93
NXF3Q9H4D5 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NXF3Q9H4D5 AC116562.4-202ENST00000641738 218 ntBASIC20.88■□□□□ 0.93
NXF3Q9H4D5 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.88■□□□□ 0.93
NXF3Q9H4D5 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms