Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NELFAQ9H3P2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NELFAQ9H3P2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NELFAQ9H3P2 NBPF21P-201ENST00000425093 1451 ntBASIC17.24■□□□□ 0.35
NELFAQ9H3P2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
NELFAQ9H3P2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NELFAQ9H3P2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NELFAQ9H3P2 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.23■□□□□ 0.35
NELFAQ9H3P2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.23■□□□□ 0.35
NELFAQ9H3P2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NELFAQ9H3P2 AC116562.4-201ENST00000641316 2276 ntBASIC17.23■□□□□ 0.35
NELFAQ9H3P2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NELFAQ9H3P2 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.23■□□□□ 0.35
NELFAQ9H3P2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.23■□□□□ 0.35
NELFAQ9H3P2 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NELFAQ9H3P2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NELFAQ9H3P2 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NELFAQ9H3P2 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NELFAQ9H3P2 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.23■□□□□ 0.35
NELFAQ9H3P2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
NELFAQ9H3P2 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NELFAQ9H3P2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NELFAQ9H3P2 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.23■□□□□ 0.35
NELFAQ9H3P2 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NELFAQ9H3P2 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
NELFAQ9H3P2 AL158047.1-201ENST00000445918 881 ntBASIC17.23■□□□□ 0.35
NELFAQ9H3P2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.23■□□□□ 0.35
NELFAQ9H3P2 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.23■□□□□ 0.35
NELFAQ9H3P2 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.23■□□□□ 0.35
NELFAQ9H3P2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.23■□□□□ 0.35
NELFAQ9H3P2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.23■□□□□ 0.35
NELFAQ9H3P2 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NELFAQ9H3P2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NELFAQ9H3P2 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.23■□□□□ 0.35
NELFAQ9H3P2 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NELFAQ9H3P2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NELFAQ9H3P2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NELFAQ9H3P2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
NELFAQ9H3P2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
NELFAQ9H3P2 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NELFAQ9H3P2 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
NELFAQ9H3P2 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.22■□□□□ 0.35
NELFAQ9H3P2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.22■□□□□ 0.35
NELFAQ9H3P2 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.22■□□□□ 0.35
NELFAQ9H3P2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NELFAQ9H3P2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
NELFAQ9H3P2 AC110285.5-201ENST00000611501 352 ntBASIC17.22■□□□□ 0.35
NELFAQ9H3P2 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.22■□□□□ 0.35
NELFAQ9H3P2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
NELFAQ9H3P2 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
NELFAQ9H3P2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NELFAQ9H3P2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NELFAQ9H3P2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.22■□□□□ 0.35
NELFAQ9H3P2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.22■□□□□ 0.35
NELFAQ9H3P2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
NELFAQ9H3P2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NELFAQ9H3P2 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
NELFAQ9H3P2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NELFAQ9H3P2 AC093484.2-201ENST00000580996 2166 ntBASIC17.22■□□□□ 0.35
NELFAQ9H3P2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NELFAQ9H3P2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NELFAQ9H3P2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NELFAQ9H3P2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NELFAQ9H3P2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NELFAQ9H3P2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
NELFAQ9H3P2 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NELFAQ9H3P2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.21■□□□□ 0.35
NELFAQ9H3P2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
NELFAQ9H3P2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NELFAQ9H3P2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NELFAQ9H3P2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
NELFAQ9H3P2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
NELFAQ9H3P2 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.21■□□□□ 0.35
NELFAQ9H3P2 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.21■□□□□ 0.35
NELFAQ9H3P2 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.21■□□□□ 0.35
NELFAQ9H3P2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.21■□□□□ 0.35
NELFAQ9H3P2 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.21■□□□□ 0.35
NELFAQ9H3P2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NELFAQ9H3P2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.21■□□□□ 0.35
NELFAQ9H3P2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.21■□□□□ 0.35
NELFAQ9H3P2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NELFAQ9H3P2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NELFAQ9H3P2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
NELFAQ9H3P2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.21■□□□□ 0.35
NELFAQ9H3P2 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NELFAQ9H3P2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
NELFAQ9H3P2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NELFAQ9H3P2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
NELFAQ9H3P2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.34
NELFAQ9H3P2 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
NELFAQ9H3P2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NELFAQ9H3P2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NELFAQ9H3P2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NELFAQ9H3P2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.2■□□□□ 0.34
NELFAQ9H3P2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
NELFAQ9H3P2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
NELFAQ9H3P2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NELFAQ9H3P2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NELFAQ9H3P2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NELFAQ9H3P2 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms