Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSBP3Q9BWW4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SSBP3Q9BWW4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSBP3Q9BWW4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.13■□□□□ 0.17
SSBP3Q9BWW4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SSBP3Q9BWW4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SSBP3Q9BWW4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.13■□□□□ 0.17
SSBP3Q9BWW4 HLA-A-209ENST00000638375 975 ntBASIC16.13■□□□□ 0.17
SSBP3Q9BWW4 FSCN1P1-201ENST00000568912 1481 ntBASIC16.13■□□□□ 0.17
SSBP3Q9BWW4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSBP3Q9BWW4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SSBP3Q9BWW4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSBP3Q9BWW4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SSBP3Q9BWW4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
SSBP3Q9BWW4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSBP3Q9BWW4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SSBP3Q9BWW4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSBP3Q9BWW4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SSBP3Q9BWW4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSBP3Q9BWW4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSBP3Q9BWW4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SSBP3Q9BWW4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.12■□□□□ 0.17
SSBP3Q9BWW4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSBP3Q9BWW4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSBP3Q9BWW4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.12■□□□□ 0.17
SSBP3Q9BWW4 AC004980.1-204ENST00000429707 299 ntBASIC16.12■□□□□ 0.17
SSBP3Q9BWW4 RBM17P1-201ENST00000453646 1190 ntBASIC16.12■□□□□ 0.17
SSBP3Q9BWW4 TSPY15P-201ENST00000457163 923 ntBASIC16.12■□□□□ 0.17
SSBP3Q9BWW4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSBP3Q9BWW4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSBP3Q9BWW4 AC116562.2-201ENST00000507042 360 ntBASIC16.12■□□□□ 0.17
SSBP3Q9BWW4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.12■□□□□ 0.17
SSBP3Q9BWW4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.12■□□□□ 0.17
SSBP3Q9BWW4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.12■□□□□ 0.17
SSBP3Q9BWW4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.12■□□□□ 0.17
SSBP3Q9BWW4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.12■□□□□ 0.17
SSBP3Q9BWW4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.12■□□□□ 0.17
SSBP3Q9BWW4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
SSBP3Q9BWW4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSBP3Q9BWW4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSBP3Q9BWW4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSBP3Q9BWW4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.12■□□□□ 0.17
SSBP3Q9BWW4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
SSBP3Q9BWW4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.12■□□□□ 0.17
SSBP3Q9BWW4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.12■□□□□ 0.17
SSBP3Q9BWW4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSBP3Q9BWW4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSBP3Q9BWW4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSBP3Q9BWW4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSBP3Q9BWW4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.11■□□□□ 0.17
SSBP3Q9BWW4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSBP3Q9BWW4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSBP3Q9BWW4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSBP3Q9BWW4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSBP3Q9BWW4 AC138932.1-201ENST00000534164 6830 ntBASIC16.11■□□□□ 0.17
SSBP3Q9BWW4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSBP3Q9BWW4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SSBP3Q9BWW4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SSBP3Q9BWW4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.11■□□□□ 0.17
SSBP3Q9BWW4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.11■□□□□ 0.17
SSBP3Q9BWW4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.11■□□□□ 0.17
SSBP3Q9BWW4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.11■□□□□ 0.17
SSBP3Q9BWW4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.11■□□□□ 0.17
SSBP3Q9BWW4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.11■□□□□ 0.17
SSBP3Q9BWW4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SSBP3Q9BWW4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSBP3Q9BWW4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
SSBP3Q9BWW4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SSBP3Q9BWW4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSBP3Q9BWW4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSBP3Q9BWW4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSBP3Q9BWW4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSBP3Q9BWW4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.1■□□□□ 0.17
SSBP3Q9BWW4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSBP3Q9BWW4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.1■□□□□ 0.17
SSBP3Q9BWW4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
SSBP3Q9BWW4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSBP3Q9BWW4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSBP3Q9BWW4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.1■□□□□ 0.17
SSBP3Q9BWW4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSBP3Q9BWW4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.1■□□□□ 0.17
SSBP3Q9BWW4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.1■□□□□ 0.17
SSBP3Q9BWW4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.1■□□□□ 0.17
SSBP3Q9BWW4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.1■□□□□ 0.17
SSBP3Q9BWW4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSBP3Q9BWW4 MIR6786-201ENST00000616843 113 ntBASIC16.1■□□□□ 0.17
SSBP3Q9BWW4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.1■□□□□ 0.17
SSBP3Q9BWW4 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.1■□□□□ 0.17
SSBP3Q9BWW4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSBP3Q9BWW4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSBP3Q9BWW4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSBP3Q9BWW4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSBP3Q9BWW4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.1■□□□□ 0.17
SSBP3Q9BWW4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSBP3Q9BWW4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.1■□□□□ 0.17
SSBP3Q9BWW4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSBP3Q9BWW4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSBP3Q9BWW4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSBP3Q9BWW4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSBP3Q9BWW4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms