Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.59□□□□□ -0.07
SSBP4Q9BWG4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SSBP4Q9BWG4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
SSBP4Q9BWG4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
SSBP4Q9BWG4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SSBP4Q9BWG4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SSBP4Q9BWG4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.07
SSBP4Q9BWG4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SSBP4Q9BWG4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
SSBP4Q9BWG4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC14.58□□□□□ -0.07
SSBP4Q9BWG4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP4Q9BWG4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP4Q9BWG4 AC006333.2-201ENST00000607957 2099 ntBASIC14.58□□□□□ -0.08
SSBP4Q9BWG4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
SSBP4Q9BWG4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP4Q9BWG4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC14.58□□□□□ -0.08
SSBP4Q9BWG4 NME4-202ENST00000382940 766 ntTSL 3 BASIC14.58□□□□□ -0.08
SSBP4Q9BWG4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP4Q9BWG4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC14.58□□□□□ -0.08
SSBP4Q9BWG4 AC097381.1-201ENST00000429019 1296 ntBASIC14.58□□□□□ -0.08
SSBP4Q9BWG4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC14.58□□□□□ -0.08
SSBP4Q9BWG4 SUDS3P1-201ENST00000505831 966 ntBASIC14.58□□□□□ -0.08
SSBP4Q9BWG4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC14.58□□□□□ -0.08
SSBP4Q9BWG4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC14.58□□□□□ -0.08
SSBP4Q9BWG4 MIR6084-201ENST00000622012 110 ntBASIC14.58□□□□□ -0.08
SSBP4Q9BWG4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP4Q9BWG4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP4Q9BWG4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
SSBP4Q9BWG4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP4Q9BWG4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP4Q9BWG4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP4Q9BWG4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.58□□□□□ -0.08
SSBP4Q9BWG4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.58□□□□□ -0.08
SSBP4Q9BWG4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP4Q9BWG4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP4Q9BWG4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP4Q9BWG4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.58□□□□□ -0.08
SSBP4Q9BWG4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SSBP4Q9BWG4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.58□□□□□ -0.08
SSBP4Q9BWG4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP4Q9BWG4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 AL161938.1-201ENST00000569833 2180 ntBASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 NOC2LP2-201ENST00000407594 1944 ntBASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 AC027612.3-201ENST00000413684 1047 ntBASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 AC008406.3-201ENST00000620001 1374 ntBASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SSBP4Q9BWG4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SSBP4Q9BWG4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP4Q9BWG4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC14.56□□□□□ -0.08
SSBP4Q9BWG4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC14.56□□□□□ -0.08
SSBP4Q9BWG4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP4Q9BWG4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
SSBP4Q9BWG4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP4Q9BWG4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP4Q9BWG4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.56□□□□□ -0.08
SSBP4Q9BWG4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC14.56□□□□□ -0.08
SSBP4Q9BWG4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP4Q9BWG4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC14.56□□□□□ -0.08
SSBP4Q9BWG4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC14.56□□□□□ -0.08
SSBP4Q9BWG4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC14.56□□□□□ -0.08
SSBP4Q9BWG4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC14.56□□□□□ -0.08
SSBP4Q9BWG4 AL356652.1-201ENST00000615962 565 ntBASIC14.56□□□□□ -0.08
SSBP4Q9BWG4 AC110285.6-201ENST00000617652 491 ntBASIC14.56□□□□□ -0.08
SSBP4Q9BWG4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC14.56□□□□□ -0.08
SSBP4Q9BWG4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SSBP4Q9BWG4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP4Q9BWG4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC14.56□□□□□ -0.08
SSBP4Q9BWG4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
SSBP4Q9BWG4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms