Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM62Q9BVG3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM62Q9BVG3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM62Q9BVG3 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.19■□□□□ 0.82
TRIM62Q9BVG3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM62Q9BVG3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM62Q9BVG3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM62Q9BVG3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM62Q9BVG3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.19■□□□□ 0.82
TRIM62Q9BVG3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM62Q9BVG3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM62Q9BVG3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM62Q9BVG3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIM62Q9BVG3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIM62Q9BVG3 MIR4497-201ENST00000583208 89 ntBASIC20.19■□□□□ 0.82
TRIM62Q9BVG3 AC026471.5-201ENST00000615068 467 ntBASIC20.19■□□□□ 0.82
TRIM62Q9BVG3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.19■□□□□ 0.82
TRIM62Q9BVG3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM62Q9BVG3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.19■□□□□ 0.82
TRIM62Q9BVG3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM62Q9BVG3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.19■□□□□ 0.82
TRIM62Q9BVG3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.19■□□□□ 0.82
TRIM62Q9BVG3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
TRIM62Q9BVG3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM62Q9BVG3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.19■□□□□ 0.82
TRIM62Q9BVG3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM62Q9BVG3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM62Q9BVG3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIM62Q9BVG3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM62Q9BVG3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TRIM62Q9BVG3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM62Q9BVG3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TRIM62Q9BVG3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.18■□□□□ 0.82
TRIM62Q9BVG3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM62Q9BVG3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TRIM62Q9BVG3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM62Q9BVG3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TRIM62Q9BVG3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.18■□□□□ 0.82
TRIM62Q9BVG3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM62Q9BVG3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM62Q9BVG3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM62Q9BVG3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.18■□□□□ 0.82
TRIM62Q9BVG3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.18■□□□□ 0.82
TRIM62Q9BVG3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.18■□□□□ 0.82
TRIM62Q9BVG3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.18■□□□□ 0.82
TRIM62Q9BVG3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM62Q9BVG3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM62Q9BVG3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM62Q9BVG3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM62Q9BVG3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM62Q9BVG3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.18■□□□□ 0.82
TRIM62Q9BVG3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM62Q9BVG3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM62Q9BVG3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
TRIM62Q9BVG3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM62Q9BVG3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM62Q9BVG3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
TRIM62Q9BVG3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM62Q9BVG3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM62Q9BVG3 SNORA78-201ENST00000459373 127 ntBASIC20.17■□□□□ 0.82
TRIM62Q9BVG3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM62Q9BVG3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM62Q9BVG3 DGCR10-201ENST00000609839 495 ntBASIC20.17■□□□□ 0.82
TRIM62Q9BVG3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM62Q9BVG3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM62Q9BVG3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
TRIM62Q9BVG3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM62Q9BVG3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
TRIM62Q9BVG3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM62Q9BVG3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM62Q9BVG3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM62Q9BVG3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TRIM62Q9BVG3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM62Q9BVG3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM62Q9BVG3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM62Q9BVG3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM62Q9BVG3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM62Q9BVG3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM62Q9BVG3 AC004951.3-201ENST00000418645 1148 ntBASIC20.16■□□□□ 0.82
TRIM62Q9BVG3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.16■□□□□ 0.82
TRIM62Q9BVG3 Z85996.1-201ENST00000494644 937 ntBASIC20.16■□□□□ 0.82
TRIM62Q9BVG3 AC116562.2-201ENST00000507042 360 ntBASIC20.16■□□□□ 0.82
TRIM62Q9BVG3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.16■□□□□ 0.82
TRIM62Q9BVG3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM62Q9BVG3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TRIM62Q9BVG3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM62Q9BVG3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM62Q9BVG3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM62Q9BVG3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM62Q9BVG3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM62Q9BVG3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TRIM62Q9BVG3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM62Q9BVG3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM62Q9BVG3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM62Q9BVG3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM62Q9BVG3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM62Q9BVG3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM62Q9BVG3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TRIM62Q9BVG3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
TRIM62Q9BVG3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms